| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRCGPVGHPLPDAPPPSPLYTPPPPTSPYAVRPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEPNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8846 | |
| 2 | L | A | 1.8132 | |
| 3 | P | A | 0.5174 | |
| 4 | P | A | 0.1713 | |
| 5 | T | A | -0.0451 | |
| 6 | T | A | -0.0663 | |
| 7 | P | A | 0.2653 | |
| 8 | V | A | 1.2381 | |
| 9 | A | A | 0.0522 | |
| 10 | K | A | -1.0081 | |
| 11 | V | A | -0.1518 | |
| 12 | Q | A | -1.3886 | |
| 13 | S | A | -1.5447 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4197 | |
| 16 | E | A | -2.4384 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4561 | |
| 20 | P | A | 0.1267 | |
| 21 | T | A | 0.1590 | |
| 22 | S | A | -0.0949 | |
| 23 | L | A | 0.1184 | |
| 24 | F | A | -0.0259 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2899 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9059 | |
| 31 | R | A | -2.6919 | |
| 32 | L | A | -0.8067 | |
| 33 | L | A | 1.1561 | |
| 34 | T | A | 1.3675 | |
| 35 | V | A | 1.8259 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1773 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5687 | |
| 40 | K | A | -1.4993 | |
| 41 | D | A | -0.6463 | |
| 42 | I | A | 1.0296 | |
| 43 | I | A | 1.1587 | |
| 44 | K | A | -1.2907 | |
| 45 | D | A | -2.3909 | |
| 46 | G | A | -1.4290 | |
| 47 | K | A | -1.0515 | |
| 48 | V | A | 1.4588 | |
| 49 | V | A | 2.0297 | |
| 50 | V | A | 1.3282 | |
| 51 | P | A | 0.5394 | |
| 52 | K | A | -0.5738 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1464 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4069 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2720 | |
| 70 | K | A | -1.7922 | |
| 71 | F | A | -0.6435 | |
| 72 | A | A | -0.5784 | |
| 73 | L | A | -0.8630 | |
| 74 | P | A | -1.2735 | |
| 75 | Q | A | -2.5059 | |
| 76 | K | A | -3.1087 | |
| 77 | D | A | -2.9914 | |
| 78 | F | A | -1.6576 | |
| 79 | Y | A | -1.8889 | |
| 80 | D | A | -2.6896 | |
| 81 | P | A | -2.3685 | |
| 82 | E | A | -3.0548 | |
| 83 | K | A | -3.3987 | |
| 84 | E | A | -2.4643 | |
| 85 | R | A | -1.2971 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6510 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9689 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3705 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7043 | |
| 99 | G | A | -0.5396 | |
| 100 | P | A | -0.4103 | |
| 101 | L | A | 0.0313 | |
| 102 | G | A | -0.2157 | |
| 103 | K | A | -0.6046 | |
| 104 | G | A | -0.4358 | |
| 105 | T | A | -0.4367 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1592 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4380 | |
| 110 | L | A | 0.3664 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1018 | |
| 113 | K | A | -0.4286 | |
| 114 | L | A | -0.7700 | |
| 115 | G | A | -0.7157 | |
| 116 | D | A | -1.3147 | |
| 117 | T | A | -0.8863 | |
| 118 | E | A | -1.8739 | |
| 119 | N | A | -1.9839 | |
| 120 | P | A | -1.3693 | |
| 121 | T | A | -0.6795 | |
| 122 | A | A | -0.3452 | |
| 123 | P | A | 0.1408 | |
| 124 | V | A | 0.1418 | |
| 125 | H | A | -0.2289 | |
| 126 | C | A | -0.6938 | |
| 127 | G | A | -1.1700 | |
| 128 | A | A | -1.1838 | |
| 129 | D | A | -2.1951 | |
| 130 | D | A | -1.7320 | |
| 131 | R | A | -1.1232 | |
| 132 | V | A | 0.2555 | |
| 133 | A | A | 0.4756 | |
| 134 | F | A | 0.3121 | |
| 135 | S | A | -0.0589 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4416 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5681 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2217 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1627 | |
| 157 | D | A | 0.4980 | |
| 158 | I | A | 1.2149 | |
| 159 | A | A | 0.9104 | |
| 160 | P | A | 0.0724 | |
| 161 | P | A | 0.4413 | |
| 162 | C | A | 0.5025 | |
| 163 | P | A | -0.0033 | |
| 164 | G | A | -0.1085 | |
| 165 | L | A | 0.5374 | |
| 166 | P | A | -0.1304 | |
| 167 | P | A | -0.3465 | |
| 168 | G | A | -0.4531 | |
| 169 | A | A | -0.0319 | |
| 170 | C | A | 0.7275 | |
| 171 | P | A | 0.7748 | |
| 172 | P | A | 1.1519 | |
| 173 | I | A | 2.3489 | |
| 174 | Q | A | 1.2406 | |
| 175 | L | A | 1.5272 | |
| 176 | V | A | 0.8645 | |
| 177 | N | A | -0.2974 | |
| 178 | S | A | -0.0887 | |
| 179 | V | A | 0.4322 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3783 | |
| 182 | D | A | 0.0753 | |
| 183 | G | A | -0.1600 | |
| 184 | D | A | -0.5452 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1187 | |
| 190 | F | A | 0.0605 | |
| 191 | G | A | -0.1075 | |
| 192 | N | A | -0.2756 | |
| 193 | M | A | -0.1286 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3842 | |
| 197 | E | A | -2.5966 | |
| 198 | L | A | -1.2211 | |
| 199 | Q | A | -2.5387 | |
| 200 | Q | A | -3.3094 | |
| 201 | D | A | -3.5833 | |
| 202 | R | A | -3.3185 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1935 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3586 | |
| 211 | S | A | -1.8929 | |
| 212 | T | A | -1.4484 | |
| 213 | R | A | -2.1142 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1679 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3295 | |
| 220 | L | A | 0.5927 | |
| 221 | K | A | -1.1288 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8235 | |
| 224 | N | A | -1.5032 | |
| 225 | E | A | -1.2460 | |
| 226 | A | A | -0.5990 | |
| 227 | Y | A | -0.3556 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6625 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0716 | |
| 234 | F | A | 0.2510 | |
| 235 | G | A | -0.8227 | |
| 236 | R | A | -2.6037 | |
| 237 | R | A | -2.8665 | |
| 238 | E | A | -2.1364 | |
| 239 | Q | A | -0.1977 | |
| 240 | V | A | 1.4195 | |
| 241 | Y | A | 1.1689 | |
| 242 | A | A | 0.3063 | |
| 243 | R | A | -0.7625 | |
| 244 | H | A | -0.7767 | |
| 245 | F | A | 0.0170 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.3447 | |
| 249 | C | A | -0.6755 | |
| 250 | G | A | -0.8422 | |
| 251 | P | A | -0.5539 | |
| 252 | V | A | -0.6545 | |
| 253 | G | A | -0.9390 | |
| 254 | H | A | -1.1662 | |
| 255 | P | A | -0.9428 | |
| 256 | L | A | -0.2449 | |
| 257 | P | A | -0.8466 | |
| 258 | D | A | -1.8848 | |
| 259 | A | A | -0.8865 | |
| 260 | P | A | -0.9224 | |
| 261 | P | A | -0.6280 | |
| 262 | P | A | -0.3263 | |
| 263 | S | A | -0.1739 | |
| 264 | P | A | 0.4003 | |
| 265 | L | A | 1.4965 | |
| 266 | Y | A | 0.6074 | |
| 267 | T | A | 0.0564 | |
| 268 | P | A | -0.3753 | |
| 269 | P | A | -0.0050 | |
| 270 | P | A | -0.3559 | |
| 271 | P | A | -0.0901 | |
| 272 | T | A | -0.0097 | |
| 273 | S | A | 0.2610 | |
| 274 | P | A | 0.3652 | |
| 275 | Y | A | 1.0665 | |
| 276 | A | A | 0.8536 | |
| 277 | V | A | 1.5163 | |
| 278 | R | A | 0.3295 | |
| 279 | P | A | 0.0520 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | 0.0392 | |
| 282 | D | A | -0.4101 | |
| 283 | Y | A | 1.0109 | |
| 284 | F | A | 0.7596 | |
| 285 | G | A | 0.1838 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9577 | |
| 291 | L | A | 1.6257 | |
| 292 | V | A | 0.6384 | |
| 293 | S | A | -0.1616 | |
| 294 | S | A | -0.9630 | |
| 295 | D | A | -1.8430 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1044 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6376 | |
| 301 | R | A | -1.8457 | |
| 302 | P | A | -0.9847 | |
| 303 | F | A | -0.1951 | |
| 304 | W | A | -0.5642 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0829 | |
| 307 | R | A | -2.8336 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2609 | |
| 310 | G | A | -1.2283 | |
| 311 | N | A | -1.2725 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8437 | |
| 319 | N | A | -0.9460 | |
| 320 | E | A | -1.0435 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3453 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0755 | |
| 333 | N | A | 0.5588 | |
| 334 | F | A | 1.7643 | |
| 335 | T | A | 0.8660 | |
| 336 | I | A | 0.3769 | |
| 337 | S | A | -1.0040 | |
| 338 | Q | A | -1.7153 | |
| 339 | Q | A | -1.5098 | |
| 340 | L | A | 0.2085 | |
| 341 | S | A | -0.2783 | |
| 342 | T | A | -0.7052 | |
| 343 | P | A | -1.3415 | |
| 344 | E | A | -1.9328 | |
| 345 | P | A | -0.9068 | |
| 346 | N | A | -0.7714 | |
| 347 | V | A | 1.2477 | |
| 348 | Y | A | 1.1512 | |
| 349 | D | A | -0.1202 | |
| 350 | P | A | -0.7082 | |
| 351 | S | A | -0.5519 | |
| 352 | N | A | -0.5855 | |
| 353 | F | A | -1.0216 | |
| 354 | K | A | -1.9892 | |
| 355 | N | A | -1.8212 | |
| 356 | Y | A | -0.1595 | |
| 357 | L | A | 0.6353 | |
| 358 | R | A | 0.9608 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3959 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0811 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0738 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6946 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3055 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3308 | |
| 376 | L | A | -1.7455 | |
| 377 | D | A | -2.0239 | |
| 378 | P | A | -0.8825 | |
| 379 | G | A | -0.9017 | |
| 380 | V | A | -0.9417 | |
| 381 | L | A | -0.2857 | |
| 382 | A | A | -0.0311 | |
| 383 | H | A | -0.5757 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.4865 | |
| 386 | T | A | -0.0398 | |
| 387 | M | A | -0.1228 | |
| 388 | N | A | -0.6764 | |
| 389 | P | A | -1.0203 | |
| 390 | T | A | -1.3615 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3574 | |
| 393 | E | A | -2.7378 | |
| 394 | N | A | -2.4451 | |
| 395 | W | A | -1.4177 | |
| 396 | N | A | -1.1767 | |
| 397 | L | A | -0.2022 | |
| 398 | G | A | 0.4861 | |
| 399 | F | A | 2.4066 | |
| 400 | V | A | 1.8236 | |
| 401 | P | A | 0.0384 | |
| 402 | P | A | -1.8827 | |
| 403 | K | A | -3.3293 | |
| 404 | E | A | -3.8000 | |
| 405 | R | A | -3.9644 | |
| 406 | E | A | -3.8178 | |
| 407 | D | A | -2.8905 | |
| 408 | P | A | -1.7770 | |
| 409 | Y | A | -0.9887 | |
| 410 | K | A | -2.1201 | |
| 411 | G | A | -0.6402 | |
| 412 | L | A | 0.6703 | |
| 413 | I | A | 1.5850 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3908 | |
| 416 | E | A | -1.6847 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9478 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0516 | |
| 421 | E | A | -2.7830 | |
| 422 | R | A | -2.6367 | |
| 423 | F | A | -1.2803 | |
| 424 | S | A | -1.4654 | |
| 425 | Q | A | -1.8716 | |
| 426 | D | A | -2.9606 | |
| 427 | L | A | -2.1513 | |
| 428 | D | A | -3.0079 | |
| 429 | Q | A | -2.7436 | |
| 430 | F | A | -1.6011 | |
| 431 | A | A | -1.1240 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2379 | |
| 435 | K | A | -1.0757 | |
| 436 | F | A | -0.0939 | |
| 437 | L | A | 0.7982 | |
| 438 | Y | A | 0.6366 | |
| 439 | Q | A | -0.3849 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine