| Chain sequence(s) |
A: IVIVKGHE
B: IVIVKGHE input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.2206 | |
| 2 | V | A | 3.9197 | |
| 3 | I | A | 3.8438 | |
| 4 | V | A | 0.3311 | |
| 5 | K | A | -2.3454 | |
| 6 | G | A | -2.5769 | |
| 7 | H | A | -3.4767 | |
| 8 | E | A | -3.2179 | |
| 1 | I | B | 3.8207 | |
| 2 | V | B | 4.4777 | |
| 3 | I | B | 3.5644 | |
| 4 | V | B | 1.7436 | |
| 5 | K | B | -2.2666 | |
| 6 | G | B | -2.3319 | |
| 7 | H | B | -2.5243 | |
| 8 | E | B | -3.2136 |