| Chain sequence(s) |
A: GKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGREYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:16)
[INFO] Main: Simulation completed successfully. (00:02:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.5315 | |
| 2 | K | A | -2.5345 | |
| 3 | I | A | 0.0000 | |
| 4 | T | A | 0.0000 | |
| 5 | L | A | 0.0000 | |
| 6 | Y | A | -2.0878 | |
| 7 | E | A | 0.0000 | |
| 8 | D | A | -2.7114 | |
| 9 | R | A | -2.6151 | |
| 10 | G | A | -1.7701 | |
| 11 | F | A | -1.8081 | |
| 12 | Q | A | -2.5720 | |
| 13 | G | A | -2.6275 | |
| 14 | R | A | -2.7444 | |
| 15 | H | A | -2.3234 | |
| 16 | Y | A | -1.4009 | |
| 17 | E | A | -2.3102 | |
| 18 | C | A | -1.5530 | |
| 19 | S | A | -1.4291 | |
| 20 | S | A | -1.3856 | |
| 21 | D | A | -1.5834 | |
| 22 | H | A | 0.0000 | |
| 23 | P | A | -1.5337 | |
| 24 | N | A | -1.5238 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.7083 | |
| 27 | P | A | -0.5520 | |
| 28 | Y | A | -0.4616 | |
| 29 | L | A | 0.0000 | |
| 30 | S | A | -1.4336 | |
| 31 | R | A | -2.1174 | |
| 32 | C | A | 0.0000 | |
| 33 | N | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | A | A | 0.0000 | |
| 36 | R | A | -2.8530 | |
| 37 | V | A | 0.0000 | |
| 38 | D | A | -3.1137 | |
| 39 | S | A | -1.7014 | |
| 40 | G | A | -1.0071 | |
| 41 | C | A | 0.0000 | |
| 42 | W | A | 0.0000 | |
| 43 | M | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | Y | A | 0.0000 | |
| 46 | E | A | -1.1061 | |
| 47 | Q | A | -1.5599 | |
| 48 | P | A | -1.5940 | |
| 49 | N | A | -1.6278 | |
| 50 | Y | A | -1.0154 | |
| 51 | S | A | -0.8732 | |
| 52 | G | A | -0.8401 | |
| 53 | L | A | -0.0719 | |
| 54 | Q | A | -0.1318 | |
| 55 | Y | A | 0.0000 | |
| 56 | F | A | 0.1399 | |
| 57 | L | A | 0.0000 | |
| 58 | R | A | -1.1753 | |
| 59 | R | A | -2.0535 | |
| 60 | G | A | -2.2852 | |
| 61 | D | A | -2.9079 | |
| 62 | Y | A | -2.0410 | |
| 63 | A | A | -2.0220 | |
| 64 | D | A | -2.1511 | |
| 65 | H | A | -1.7240 | |
| 66 | Q | A | -1.8349 | |
| 67 | Q | A | -2.0204 | |
| 68 | W | A | 0.0000 | |
| 69 | M | A | -0.6378 | |
| 70 | G | A | -0.6036 | |
| 71 | L | A | 0.3231 | |
| 72 | S | A | -0.6871 | |
| 73 | D | A | -2.0351 | |
| 74 | S | A | -1.4639 | |
| 75 | V | A | 0.0000 | |
| 76 | R | A | -1.6579 | |
| 77 | S | A | 0.0000 | |
| 78 | C | A | 0.0000 | |
| 79 | R | A | -0.9806 | |
| 80 | L | A | -0.6921 | |
| 81 | I | A | 0.0000 | |
| 82 | P | A | -0.6576 | |
| 83 | H | A | -0.9381 | |
| 84 | S | A | -1.0581 | |
| 85 | G | A | -0.8706 | |
| 86 | S | A | -1.3495 | |
| 87 | H | A | 0.0000 | |
| 88 | R | A | -2.5465 | |
| 89 | I | A | 0.0000 | |
| 90 | R | A | -1.2236 | |
| 91 | L | A | 0.0000 | |
| 92 | Y | A | -1.7429 | |
| 93 | E | A | 0.0000 | |
| 94 | R | A | -4.0607 | |
| 95 | E | A | -4.3667 | |
| 96 | D | A | -3.5261 | |
| 97 | Y | A | -2.7956 | |
| 98 | R | A | -3.4422 | |
| 99 | G | A | -2.4722 | |
| 100 | Q | A | -1.7108 | |
| 101 | M | A | -0.5716 | |
| 102 | I | A | -0.6982 | |
| 103 | E | A | -1.8052 | |
| 104 | F | A | 0.0000 | |
| 105 | T | A | -2.2972 | |
| 106 | E | A | -2.8554 | |
| 107 | D | A | -2.0686 | |
| 108 | C | A | 0.0000 | |
| 109 | S | A | -1.2537 | |
| 110 | C | A | -1.2071 | |
| 111 | L | A | 0.0000 | |
| 112 | Q | A | -2.6156 | |
| 113 | D | A | -3.1814 | |
| 114 | R | A | -3.1296 | |
| 115 | F | A | 0.0000 | |
| 116 | R | A | -3.0830 | |
| 117 | F | A | -1.9793 | |
| 118 | N | A | -2.0604 | |
| 119 | E | A | -2.1398 | |
| 120 | I | A | 0.0000 | |
| 121 | H | A | -3.2162 | |
| 122 | S | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | N | A | -1.5932 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | -1.1553 | |
| 127 | E | A | -1.7755 | |
| 128 | G | A | -1.2614 | |
| 129 | S | A | 0.0000 | |
| 130 | W | A | 0.0000 | |
| 131 | V | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | Y | A | 0.0000 | |
| 134 | E | A | -1.3243 | |
| 135 | L | A | -0.8038 | |
| 136 | S | A | -0.9415 | |
| 137 | N | A | -1.6772 | |
| 138 | Y | A | -1.4247 | |
| 139 | R | A | -2.1350 | |
| 140 | G | A | -1.1969 | |
| 141 | R | A | -1.0357 | |
| 142 | E | A | 0.0000 | |
| 143 | Y | A | 0.0495 | |
| 144 | L | A | 0.3086 | |
| 145 | L | A | 0.0000 | |
| 146 | M | A | -0.0496 | |
| 147 | P | A | -0.8420 | |
| 148 | G | A | -1.4264 | |
| 149 | D | A | -2.6898 | |
| 150 | Y | A | -3.0859 | |
| 151 | R | A | -4.6524 | |
| 152 | R | A | -4.5493 | |
| 153 | Y | A | -2.8057 | |
| 154 | Q | A | -2.9985 | |
| 155 | D | A | -3.4396 | |
| 156 | W | A | 0.0000 | |
| 157 | G | A | -1.8424 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.8582 | |
| 160 | N | A | -1.3520 | |
| 161 | A | A | -1.5829 | |
| 162 | R | A | -1.5993 | |
| 163 | V | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | S | A | 0.0000 | |
| 166 | L | A | 0.0000 | |
| 167 | R | A | -1.3706 | |
| 168 | R | A | -1.4224 | |
| 169 | V | A | 0.0000 | |
| 170 | I | A | 0.1025 | |
| 171 | D | A | 0.3013 | |
| 172 | F | A | 1.5618 | |
| 173 | S | A | 0.3312 |