| Chain sequence(s) |
A: MAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRSRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLEICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYRS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LR308A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 6.70292 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:02:25)
[INFO] FoldX: Starting FoldX energy minimalization (00:02:44)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:57)
[INFO] Main: Simulation completed successfully. (00:04:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.1060 | |
| 2 | A | A | 0.6246 | |
| 3 | A | A | 0.4167 | |
| 4 | A | A | 0.3144 | |
| 5 | A | A | 0.0878 | |
| 6 | A | A | -0.0152 | |
| 7 | A | A | -0.1862 | |
| 8 | G | A | -0.5262 | |
| 9 | A | A | -0.6346 | |
| 10 | G | A | -0.9713 | |
| 11 | P | A | -1.2302 | |
| 12 | E | A | -1.0192 | |
| 13 | M | A | -0.0881 | |
| 14 | V | A | -0.4194 | |
| 15 | R | A | -1.7749 | |
| 16 | G | A | -1.2421 | |
| 17 | Q | A | -1.0289 | |
| 18 | V | A | -0.2908 | |
| 19 | F | A | 0.0000 | |
| 20 | D | A | -1.9918 | |
| 21 | V | A | 0.0000 | |
| 22 | G | A | -1.7898 | |
| 23 | P | A | -1.1052 | |
| 24 | R | A | -0.8772 | |
| 25 | Y | A | 0.0000 | |
| 26 | T | A | -1.3026 | |
| 27 | N | A | -1.3787 | |
| 28 | L | A | -0.1665 | |
| 29 | S | A | 0.1394 | |
| 30 | Y | A | 0.4516 | |
| 31 | I | A | 0.7759 | |
| 32 | G | A | -0.3843 | |
| 33 | E | A | -1.7231 | |
| 34 | G | A | -1.3336 | |
| 35 | A | A | -0.4491 | |
| 36 | Y | A | -0.3838 | |
| 37 | G | A | -0.6796 | |
| 38 | M | A | 0.0000 | |
| 39 | V | A | 0.1034 | |
| 40 | C | A | 0.0000 | |
| 41 | S | A | 0.0000 | |
| 42 | A | A | 0.0000 | |
| 43 | Y | A | -0.2982 | |
| 44 | D | A | 0.0000 | |
| 45 | N | A | -0.9089 | |
| 46 | V | A | 0.3914 | |
| 47 | N | A | -1.1217 | |
| 48 | K | A | -1.4044 | |
| 49 | V | A | -0.0436 | |
| 50 | R | A | -0.5821 | |
| 51 | V | A | 0.0000 | |
| 52 | A | A | -0.2495 | |
| 53 | I | A | 0.0000 | |
| 54 | K | A | -0.2718 | |
| 55 | K | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | S | A | -0.9238 | |
| 58 | P | A | 0.0000 | |
| 59 | F | A | -1.9656 | |
| 60 | E | A | -2.8067 | |
| 61 | H | A | -2.2610 | |
| 62 | Q | A | -2.4264 | |
| 63 | T | A | -1.0804 | |
| 64 | Y | A | -0.6130 | |
| 65 | C | A | 0.0000 | |
| 66 | Q | A | 0.0000 | |
| 67 | R | A | -0.3284 | |
| 68 | T | A | 0.0000 | |
| 69 | L | A | 0.0000 | |
| 70 | R | A | 0.0000 | |
| 71 | E | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | K | A | -0.6873 | |
| 74 | I | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | L | A | -0.8824 | |
| 77 | R | A | -2.0655 | |
| 78 | S | A | -1.9851 | |
| 79 | R | A | -2.5332 | |
| 80 | H | A | 0.0000 | |
| 81 | E | A | -2.4074 | |
| 82 | N | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | G | A | -1.3652 | |
| 86 | I | A | -0.8825 | |
| 87 | N | A | -1.1509 | |
| 88 | D | A | -0.6988 | |
| 89 | I | A | 0.0000 | |
| 90 | I | A | -0.1655 | |
| 91 | R | A | -0.7874 | |
| 92 | A | A | -1.2776 | |
| 93 | P | A | -0.7407 | |
| 94 | T | A | -1.0503 | |
| 95 | I | A | -1.9046 | |
| 96 | E | A | -2.5537 | |
| 97 | Q | A | -2.5238 | |
| 98 | M | A | 0.0000 | |
| 99 | K | A | -2.6502 | |
| 100 | D | A | -1.3937 | |
| 101 | V | A | 0.0000 | |
| 102 | Y | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | V | A | 0.0000 | |
| 105 | Q | A | -0.9600 | |
| 106 | D | A | -1.3077 | |
| 107 | L | A | -0.4170 | |
| 108 | M | A | -0.9858 | |
| 109 | E | A | -1.7307 | |
| 110 | T | A | -0.9261 | |
| 111 | D | A | 0.0000 | |
| 112 | L | A | 0.0000 | |
| 113 | Y | A | -0.7251 | |
| 114 | K | A | -1.8256 | |
| 115 | L | A | -1.3056 | |
| 116 | L | A | 0.0000 | |
| 117 | K | A | -2.7507 | |
| 118 | T | A | -1.7357 | |
| 119 | Q | A | -1.9618 | |
| 120 | H | A | -1.7925 | |
| 121 | L | A | -1.2442 | |
| 122 | S | A | -1.4890 | |
| 123 | N | A | -2.1395 | |
| 124 | D | A | -2.4315 | |
| 125 | H | A | -1.5232 | |
| 126 | I | A | 0.0000 | |
| 127 | C | A | 0.0000 | |
| 128 | Y | A | -0.6492 | |
| 129 | F | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | Y | A | 0.0000 | |
| 132 | Q | A | 0.0000 | |
| 133 | I | A | 0.0000 | |
| 134 | L | A | 0.0000 | |
| 135 | R | A | 0.0000 | |
| 136 | G | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | K | A | -0.2011 | |
| 139 | Y | A | 0.0000 | |
| 140 | I | A | 0.0000 | |
| 141 | H | A | 0.0000 | |
| 142 | S | A | -0.0829 | |
| 143 | A | A | -0.6100 | |
| 144 | N | A | -0.8586 | |
| 145 | V | A | 0.0000 | |
| 146 | L | A | 0.0000 | |
| 147 | H | A | 0.0000 | |
| 148 | R | A | -0.5316 | |
| 149 | D | A | -0.5359 | |
| 150 | L | A | 0.0000 | |
| 151 | K | A | -0.2743 | |
| 152 | P | A | 0.0000 | |
| 153 | S | A | -0.2708 | |
| 154 | N | A | 0.0000 | |
| 155 | L | A | 0.0000 | |
| 156 | L | A | -0.3008 | |
| 157 | L | A | 0.0000 | |
| 158 | N | A | -1.0590 | |
| 159 | T | A | -0.7579 | |
| 160 | T | A | -0.5620 | |
| 161 | C | A | -0.6170 | |
| 162 | D | A | -1.0554 | |
| 163 | L | A | 0.0000 | |
| 164 | E | A | -0.8191 | |
| 165 | I | A | 0.0000 | |
| 166 | C | A | -0.2722 | |
| 167 | D | A | -0.6753 | |
| 168 | F | A | 0.0000 | |
| 169 | G | A | 0.0000 | |
| 170 | L | A | -0.2108 | |
| 171 | A | A | 0.0000 | |
| 172 | R | A | -0.4569 | |
| 173 | V | A | -0.4536 | |
| 174 | A | A | -1.0042 | |
| 175 | D | A | -1.8208 | |
| 176 | P | A | -2.0077 | |
| 177 | D | A | -2.7751 | |
| 178 | H | A | -2.5378 | |
| 179 | D | A | -1.9739 | |
| 180 | H | A | -1.4628 | |
| 181 | T | A | -0.6618 | |
| 182 | G | A | -0.3432 | |
| 183 | F | A | -0.1566 | |
| 184 | L | A | 0.4480 | |
| 185 | T | A | -0.4911 | |
| 186 | E | A | -0.9467 | |
| 187 | Y | A | 0.3256 | |
| 188 | V | A | 1.3940 | |
| 189 | A | A | 0.5329 | |
| 190 | T | A | -0.1877 | |
| 191 | R | A | -0.4521 | |
| 192 | W | A | -0.3048 | |
| 193 | Y | A | 0.0000 | |
| 194 | R | A | -0.2066 | |
| 195 | A | A | 0.0000 | |
| 196 | P | A | 0.0000 | |
| 197 | E | A | 0.0000 | |
| 198 | I | A | 0.1888 | |
| 199 | M | A | 0.0000 | |
| 200 | L | A | 0.0000 | |
| 201 | N | A | -0.1628 | |
| 202 | S | A | 0.0000 | |
| 203 | K | A | -1.1325 | |
| 204 | G | A | 0.0000 | |
| 205 | Y | A | -1.0202 | |
| 206 | T | A | -1.0648 | |
| 207 | K | A | -0.9894 | |
| 208 | S | A | -1.0445 | |
| 209 | I | A | 0.0000 | |
| 210 | D | A | 0.0000 | |
| 211 | I | A | 0.0000 | |
| 212 | W | A | 0.0000 | |
| 213 | S | A | 0.0000 | |
| 214 | V | A | 0.0000 | |
| 215 | G | A | 0.0000 | |
| 216 | C | A | 0.0000 | |
| 217 | I | A | 0.0000 | |
| 218 | L | A | 0.0000 | |
| 219 | A | A | 0.0000 | |
| 220 | E | A | 0.0000 | |
| 221 | M | A | 0.0000 | |
| 222 | L | A | -0.7812 | |
| 223 | S | A | -1.0561 | |
| 224 | N | A | -1.9061 | |
| 225 | R | A | -2.2945 | |
| 226 | P | A | -0.9503 | |
| 227 | I | A | 0.0000 | |
| 228 | F | A | 0.0000 | |
| 229 | P | A | -0.8768 | |
| 230 | G | A | 0.0000 | |
| 231 | K | A | -1.7971 | |
| 232 | H | A | -0.8478 | |
| 233 | Y | A | 0.3956 | |
| 234 | L | A | 0.3069 | |
| 235 | D | A | -0.7194 | |
| 236 | Q | A | 0.0000 | |
| 237 | L | A | 0.0000 | |
| 238 | N | A | -0.7069 | |
| 239 | H | A | -0.8259 | |
| 240 | I | A | 0.0000 | |
| 241 | L | A | 0.0000 | |
| 242 | G | A | -1.1645 | |
| 243 | I | A | -0.7045 | |
| 244 | L | A | 0.0000 | |
| 245 | G | A | 0.0000 | |
| 246 | S | A | -1.2279 | |
| 247 | P | A | -1.1896 | |
| 248 | S | A | -1.5151 | |
| 249 | Q | A | -2.2927 | |
| 250 | E | A | -2.8703 | |
| 251 | D | A | -2.1377 | |
| 252 | L | A | -1.2462 | |
| 253 | N | A | -1.7371 | |
| 254 | C | A | -0.4821 | |
| 255 | I | A | 0.0000 | |
| 256 | I | A | 1.7208 | |
| 257 | N | A | 0.4450 | |
| 258 | L | A | 0.6384 | |
| 259 | K | A | -1.0543 | |
| 260 | A | A | 0.0000 | |
| 261 | R | A | -0.4321 | |
| 262 | N | A | -0.9807 | |
| 263 | Y | A | -0.2912 | |
| 264 | L | A | 0.0000 | |
| 265 | L | A | 0.5644 | |
| 266 | S | A | 0.1677 | |
| 267 | L | A | -0.0026 | |
| 268 | P | A | -0.5766 | |
| 269 | H | A | -1.7105 | |
| 270 | K | A | -2.2361 | |
| 271 | N | A | -2.5969 | |
| 272 | K | A | -2.4118 | |
| 273 | V | A | -1.2872 | |
| 274 | P | A | -1.4462 | |
| 275 | W | A | 0.0000 | |
| 276 | N | A | -2.5488 | |
| 277 | R | A | -2.3337 | |
| 278 | L | A | -0.8140 | |
| 279 | F | A | 0.0000 | |
| 280 | P | A | -1.8902 | |
| 281 | N | A | -2.0315 | |
| 282 | A | A | -1.7714 | |
| 283 | D | A | -2.0446 | |
| 284 | S | A | -1.9472 | |
| 285 | K | A | -2.1802 | |
| 286 | A | A | 0.0000 | |
| 287 | L | A | 0.0000 | |
| 288 | D | A | -2.8160 | |
| 289 | L | A | 0.0000 | |
| 290 | L | A | 0.0000 | |
| 291 | D | A | -1.9973 | |
| 292 | K | A | -2.2583 | |
| 293 | M | A | 0.0000 | |
| 294 | L | A | 0.0000 | |
| 295 | T | A | -0.9877 | |
| 296 | F | A | -0.5140 | |
| 297 | N | A | 0.0000 | |
| 298 | P | A | -1.2578 | |
| 299 | H | A | -1.9752 | |
| 300 | K | A | -2.5435 | |
| 301 | R | A | 0.0000 | |
| 302 | I | A | 0.0000 | |
| 303 | E | A | -2.7933 | |
| 304 | V | A | 0.0000 | |
| 305 | E | A | -1.9513 | |
| 306 | Q | A | -2.2198 | |
| 307 | A | A | 0.0000 | |
| 308 | R | A | 0.0000 | mutated: LR308A |
| 309 | A | A | -1.0795 | |
| 310 | H | A | 0.0000 | |
| 311 | P | A | -1.3970 | |
| 312 | Y | A | 0.0000 | |
| 313 | L | A | 0.0000 | |
| 314 | E | A | -2.3451 | |
| 315 | Q | A | -2.1060 | |
| 316 | Y | A | -1.0369 | |
| 317 | Y | A | -1.2880 | |
| 318 | D | A | -1.9180 | |
| 319 | P | A | -1.1924 | |
| 320 | S | A | -1.2966 | |
| 321 | D | A | -2.0160 | |
| 322 | E | A | 0.0000 | |
| 323 | P | A | -0.5327 | |
| 324 | I | A | 0.9663 | |
| 325 | A | A | 0.0000 | |
| 326 | E | A | -1.7309 | |
| 327 | A | A | -1.1069 | |
| 328 | P | A | -0.8888 | |
| 329 | F | A | 0.0000 | |
| 330 | K | A | -2.2805 | |
| 331 | F | A | -1.7758 | |
| 332 | D | A | -2.3185 | |
| 333 | M | A | -1.9234 | |
| 334 | E | A | -2.9971 | |
| 335 | L | A | 0.0000 | |
| 336 | D | A | -3.1908 | |
| 337 | D | A | -3.0754 | |
| 338 | L | A | -2.2870 | |
| 339 | P | A | -2.1507 | |
| 340 | K | A | -2.9539 | |
| 341 | E | A | -3.3587 | |
| 342 | K | A | -2.6114 | |
| 343 | L | A | 0.0000 | |
| 344 | K | A | -2.8887 | |
| 345 | E | A | -3.0048 | |
| 346 | L | A | -1.9511 | |
| 347 | I | A | 0.0000 | |
| 348 | F | A | -1.5941 | |
| 349 | E | A | -2.5797 | |
| 350 | E | A | -1.8144 | |
| 351 | T | A | 0.0000 | |
| 352 | A | A | -1.4581 | |
| 353 | R | A | -2.3282 | |
| 354 | F | A | -1.1459 | |
| 355 | Q | A | -1.0935 | |
| 356 | P | A | -0.9721 | |
| 357 | G | A | -1.0342 | |
| 358 | Y | A | -0.7367 | |
| 359 | R | A | -1.9548 | |
| 360 | S | A | -0.9633 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine