| Chain sequence(s) |
A: MSHHHHHHSGAVEPPESEWDAMEKKKMEIYNKGMEEYREWLKKNPDMSEEEKRKKSREILEKIREERHKEFHEVMSKYGWINS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:35)
[INFO] Main: Simulation completed successfully. (00:06:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5411 | |
| 2 | S | A | -0.6255 | |
| 3 | H | A | -1.7498 | |
| 4 | H | A | -2.3452 | |
| 5 | H | A | -2.7826 | |
| 6 | H | A | -2.7765 | |
| 7 | H | A | -2.5898 | |
| 8 | H | A | -2.1948 | |
| 9 | S | A | -1.1277 | |
| 10 | G | A | -0.7139 | |
| 11 | A | A | -0.0276 | |
| 12 | V | A | 0.6142 | |
| 13 | E | A | -1.1911 | |
| 14 | P | A | 0.0000 | |
| 15 | P | A | -1.5770 | |
| 16 | E | A | -2.7323 | |
| 17 | S | A | -2.0607 | |
| 18 | E | A | -2.2194 | |
| 19 | W | A | -2.3964 | |
| 20 | D | A | -3.6105 | |
| 21 | A | A | -2.6343 | |
| 22 | M | A | 0.0000 | |
| 23 | E | A | -3.7340 | |
| 24 | K | A | -3.6350 | |
| 25 | K | A | -3.2683 | |
| 26 | K | A | -3.1109 | |
| 27 | M | A | -1.8586 | |
| 28 | E | A | -2.6055 | |
| 29 | I | A | 0.0000 | |
| 30 | Y | A | -1.9669 | |
| 31 | N | A | -2.4574 | |
| 32 | K | A | -3.3996 | |
| 33 | G | A | -3.1664 | |
| 34 | M | A | -2.5302 | |
| 35 | E | A | -4.1025 | |
| 36 | E | A | -4.0229 | |
| 37 | Y | A | -3.1744 | |
| 38 | R | A | -3.7343 | |
| 39 | E | A | -3.9198 | |
| 40 | W | A | -2.7698 | |
| 41 | L | A | -2.7025 | |
| 42 | K | A | -3.6235 | |
| 43 | K | A | -3.2727 | |
| 44 | N | A | -2.5528 | |
| 45 | P | A | -2.0783 | |
| 46 | D | A | -2.6065 | |
| 47 | M | A | -2.1617 | |
| 48 | S | A | -2.7830 | |
| 49 | E | A | -4.1094 | |
| 50 | E | A | -4.3866 | |
| 51 | E | A | -4.1506 | |
| 52 | K | A | -4.2278 | |
| 53 | R | A | -5.1172 | |
| 54 | K | A | -5.0310 | |
| 55 | K | A | -3.8547 | |
| 56 | S | A | -3.5609 | |
| 57 | R | A | -4.4769 | |
| 58 | E | A | -4.4866 | |
| 59 | I | A | 0.0000 | |
| 60 | L | A | -2.8236 | |
| 61 | E | A | -4.4687 | |
| 62 | K | A | -4.6090 | |
| 63 | I | A | 0.0000 | |
| 64 | R | A | -4.8812 | |
| 65 | E | A | -5.1916 | |
| 66 | E | A | -4.7444 | |
| 67 | R | A | -4.5217 | |
| 68 | H | A | -4.2045 | |
| 69 | K | A | -4.2738 | |
| 70 | E | A | -3.4288 | |
| 71 | F | A | -2.0269 | |
| 72 | H | A | -2.5678 | |
| 73 | E | A | -3.0285 | |
| 74 | V | A | 0.0000 | |
| 75 | M | A | -1.0853 | |
| 76 | S | A | -1.6086 | |
| 77 | K | A | -1.9834 | |
| 78 | Y | A | -0.9216 | |
| 79 | G | A | -0.8534 | |
| 80 | W | A | -0.0323 | |
| 81 | I | A | -0.3829 | |
| 82 | N | A | -1.2723 | |
| 83 | S | A | -1.2013 |