Project name: FFKGHFF20

Status: done

Started: 2026-02-09 08:45:10
Settings
Chain sequence(s) A: FFKGHFF
C: FFKGHFF
B: FFKGHFF
E: FFKGHFF
D: FFKGHFF
G: FFKGHFF
F: FFKGHFF
I: FFKGHFF
H: FFKGHFF
K: FFKGHFF
J: FFKGHFF
M: FFKGHFF
L: FFKGHFF
O: FFKGHFF
N: FFKGHFF
Q: FFKGHFF
P: FFKGHFF
S: FFKGHFF
R: FFKGHFF
T: FFKGHFF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:13:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:13:42)
Show buried residues

Minimal score value
-0.8488
Maximal score value
3.731
Average score
1.5179
Total score value
212.5017

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 0.0000
2 F A 1.0265
3 K A 0.3223
4 G A 0.0000
5 H A 0.8246
6 F A 2.0535
7 F A 2.3072
1 F B 2.0210
2 F B 1.7807
3 K B 1.0532
4 G B 1.4440
5 H B 1.4876
6 F B 0.0000
7 F B 0.0000
1 F C 2.4407
2 F C 2.3845
3 K C 0.0000
4 G C 1.6771
5 H C 0.0000
6 F C 2.6748
7 F C 3.1741
1 F D 1.8761
2 F D 1.8240
3 K D 0.8906
4 G D 0.0000
5 H D 1.1416
6 F D 2.4024
7 F D 2.7792
1 F E 1.7369
2 F E 2.1167
3 K E -0.1577
4 G E 0.0000
5 H E 0.6907
6 F E 2.1122
7 F E 2.0741
1 F F 2.5197
2 F F 2.1902
3 K F 0.5435
4 G F 0.0000
5 H F 0.5893
6 F F 0.0000
7 F F 1.8305
1 F G 1.9328
2 F G 2.0646
3 K G 0.5768
4 G G 0.0000
5 H G 0.7608
6 F G 2.4475
7 F G 3.0233
1 F H 2.8015
2 F H 2.5719
3 K H 0.2051
4 G H 0.0000
5 H H 0.7079
6 F H 1.7254
7 F H 2.4979
1 F I 2.3585
2 F I 0.0000
3 K I -0.8488
4 G I 0.0000
5 H I 0.2745
6 F I 2.0767
7 F I 2.9691
1 F J 1.2828
2 F J 0.8667
3 K J -0.2908
4 G J 0.0000
5 H J 0.7167
6 F J 2.7290
7 F J 2.8586
1 F K 0.2510
2 F K 1.0200
3 K K 0.3579
4 G K 1.3385
5 H K 2.5884
6 F K 3.5863
7 F K 3.7310
1 F L 0.6150
2 F L 1.5486
3 K L 0.9926
4 G L 1.8247
5 H L 2.3883
6 F L 3.2505
7 F L 3.4070
1 F M 1.6091
2 F M 2.2120
3 K M 1.6492
4 G M 0.0000
5 H M 0.0000
6 F M 2.4401
7 F M 2.2453
1 F N 2.8621
2 F N 2.4366
3 K N 1.4993
4 G N 0.0000
5 H N 1.5679
6 F N 2.2171
7 F N 2.2180
1 F O 2.2841
2 F O 2.1089
3 K O 0.8675
4 G O 0.0000
5 H O 1.3441
6 F O 2.4896
7 F O 3.2044
1 F P 2.4033
2 F P 2.0630
3 K P 0.8727
4 G P 1.6458
5 H P 1.6154
6 F P 2.7803
7 F P 3.3928
1 F Q 2.8982
2 F Q 2.3926
3 K Q 1.4979
4 G Q 1.6434
5 H Q 1.5642
6 F Q 2.6127
7 F Q 3.0523
1 F R 2.8550
2 F R 1.8664
3 K R 0.8871
4 G R 0.9575
5 H R 1.2866
6 F R 2.3179
7 F R 2.7380
1 F S 2.5703
2 F S 1.4716
3 K S -0.3352
4 G S 0.4783
5 H S 0.5997
6 F S 1.8840
7 F S 2.9388
1 F T 2.2797
2 F T 2.2615
3 K T -0.2859
4 G T 0.0000
5 H T -0.1367
6 F T 0.9258
7 F T 2.2113
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Laboratory of Theory of Biopolymers 2018