| Chain sequence(s) |
A: FFKGHFF
C: FFKGHFF B: FFKGHFF E: FFKGHFF D: FFKGHFF G: FFKGHFF F: FFKGHFF I: FFKGHFF H: FFKGHFF K: FFKGHFF J: FFKGHFF M: FFKGHFF L: FFKGHFF O: FFKGHFF N: FFKGHFF Q: FFKGHFF P: FFKGHFF S: FFKGHFF R: FFKGHFF T: FFKGHFF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:13:33)
[INFO] Main: Simulation completed successfully. (00:13:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.0000 | |
| 2 | F | A | 1.0265 | |
| 3 | K | A | 0.3223 | |
| 4 | G | A | 0.0000 | |
| 5 | H | A | 0.8246 | |
| 6 | F | A | 2.0535 | |
| 7 | F | A | 2.3072 | |
| 1 | F | B | 2.0210 | |
| 2 | F | B | 1.7807 | |
| 3 | K | B | 1.0532 | |
| 4 | G | B | 1.4440 | |
| 5 | H | B | 1.4876 | |
| 6 | F | B | 0.0000 | |
| 7 | F | B | 0.0000 | |
| 1 | F | C | 2.4407 | |
| 2 | F | C | 2.3845 | |
| 3 | K | C | 0.0000 | |
| 4 | G | C | 1.6771 | |
| 5 | H | C | 0.0000 | |
| 6 | F | C | 2.6748 | |
| 7 | F | C | 3.1741 | |
| 1 | F | D | 1.8761 | |
| 2 | F | D | 1.8240 | |
| 3 | K | D | 0.8906 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | 1.1416 | |
| 6 | F | D | 2.4024 | |
| 7 | F | D | 2.7792 | |
| 1 | F | E | 1.7369 | |
| 2 | F | E | 2.1167 | |
| 3 | K | E | -0.1577 | |
| 4 | G | E | 0.0000 | |
| 5 | H | E | 0.6907 | |
| 6 | F | E | 2.1122 | |
| 7 | F | E | 2.0741 | |
| 1 | F | F | 2.5197 | |
| 2 | F | F | 2.1902 | |
| 3 | K | F | 0.5435 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | 0.5893 | |
| 6 | F | F | 0.0000 | |
| 7 | F | F | 1.8305 | |
| 1 | F | G | 1.9328 | |
| 2 | F | G | 2.0646 | |
| 3 | K | G | 0.5768 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | 0.7608 | |
| 6 | F | G | 2.4475 | |
| 7 | F | G | 3.0233 | |
| 1 | F | H | 2.8015 | |
| 2 | F | H | 2.5719 | |
| 3 | K | H | 0.2051 | |
| 4 | G | H | 0.0000 | |
| 5 | H | H | 0.7079 | |
| 6 | F | H | 1.7254 | |
| 7 | F | H | 2.4979 | |
| 1 | F | I | 2.3585 | |
| 2 | F | I | 0.0000 | |
| 3 | K | I | -0.8488 | |
| 4 | G | I | 0.0000 | |
| 5 | H | I | 0.2745 | |
| 6 | F | I | 2.0767 | |
| 7 | F | I | 2.9691 | |
| 1 | F | J | 1.2828 | |
| 2 | F | J | 0.8667 | |
| 3 | K | J | -0.2908 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | 0.7167 | |
| 6 | F | J | 2.7290 | |
| 7 | F | J | 2.8586 | |
| 1 | F | K | 0.2510 | |
| 2 | F | K | 1.0200 | |
| 3 | K | K | 0.3579 | |
| 4 | G | K | 1.3385 | |
| 5 | H | K | 2.5884 | |
| 6 | F | K | 3.5863 | |
| 7 | F | K | 3.7310 | |
| 1 | F | L | 0.6150 | |
| 2 | F | L | 1.5486 | |
| 3 | K | L | 0.9926 | |
| 4 | G | L | 1.8247 | |
| 5 | H | L | 2.3883 | |
| 6 | F | L | 3.2505 | |
| 7 | F | L | 3.4070 | |
| 1 | F | M | 1.6091 | |
| 2 | F | M | 2.2120 | |
| 3 | K | M | 1.6492 | |
| 4 | G | M | 0.0000 | |
| 5 | H | M | 0.0000 | |
| 6 | F | M | 2.4401 | |
| 7 | F | M | 2.2453 | |
| 1 | F | N | 2.8621 | |
| 2 | F | N | 2.4366 | |
| 3 | K | N | 1.4993 | |
| 4 | G | N | 0.0000 | |
| 5 | H | N | 1.5679 | |
| 6 | F | N | 2.2171 | |
| 7 | F | N | 2.2180 | |
| 1 | F | O | 2.2841 | |
| 2 | F | O | 2.1089 | |
| 3 | K | O | 0.8675 | |
| 4 | G | O | 0.0000 | |
| 5 | H | O | 1.3441 | |
| 6 | F | O | 2.4896 | |
| 7 | F | O | 3.2044 | |
| 1 | F | P | 2.4033 | |
| 2 | F | P | 2.0630 | |
| 3 | K | P | 0.8727 | |
| 4 | G | P | 1.6458 | |
| 5 | H | P | 1.6154 | |
| 6 | F | P | 2.7803 | |
| 7 | F | P | 3.3928 | |
| 1 | F | Q | 2.8982 | |
| 2 | F | Q | 2.3926 | |
| 3 | K | Q | 1.4979 | |
| 4 | G | Q | 1.6434 | |
| 5 | H | Q | 1.5642 | |
| 6 | F | Q | 2.6127 | |
| 7 | F | Q | 3.0523 | |
| 1 | F | R | 2.8550 | |
| 2 | F | R | 1.8664 | |
| 3 | K | R | 0.8871 | |
| 4 | G | R | 0.9575 | |
| 5 | H | R | 1.2866 | |
| 6 | F | R | 2.3179 | |
| 7 | F | R | 2.7380 | |
| 1 | F | S | 2.5703 | |
| 2 | F | S | 1.4716 | |
| 3 | K | S | -0.3352 | |
| 4 | G | S | 0.4783 | |
| 5 | H | S | 0.5997 | |
| 6 | F | S | 1.8840 | |
| 7 | F | S | 2.9388 | |
| 1 | F | T | 2.2797 | |
| 2 | F | T | 2.2615 | |
| 3 | K | T | -0.2859 | |
| 4 | G | T | 0.0000 | |
| 5 | H | T | -0.1367 | |
| 6 | F | T | 0.9258 | |
| 7 | F | T | 2.2113 |