| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGSVGHPLFNKLGDTENPTEPQHCGPDDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPDAPPPSPLYTPPPPSSPYAVRPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPANNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.6624 | |
| 2 | L | A | 1.3730 | |
| 3 | P | A | 0.2917 | |
| 4 | P | A | 0.0484 | |
| 5 | T | A | -0.1062 | |
| 6 | T | A | -0.0569 | |
| 7 | P | A | 0.2692 | |
| 8 | V | A | 1.1978 | |
| 9 | A | A | -0.0353 | |
| 10 | K | A | -1.1373 | |
| 11 | V | A | -0.4200 | |
| 12 | Q | A | -1.5367 | |
| 13 | S | A | -1.6074 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4270 | |
| 16 | E | A | -2.4449 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4593 | |
| 20 | P | A | 0.1070 | |
| 21 | T | A | 0.1166 | |
| 22 | S | A | -0.1682 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0987 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1814 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8262 | |
| 31 | R | A | -2.6531 | |
| 32 | L | A | -0.7705 | |
| 33 | L | A | 1.2232 | |
| 34 | T | A | 1.4671 | |
| 35 | V | A | 2.0046 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2141 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6086 | |
| 40 | K | A | -1.7908 | |
| 41 | D | A | -0.8763 | |
| 42 | I | A | 0.8426 | |
| 43 | V | A | 1.0258 | |
| 44 | K | A | -1.1818 | |
| 45 | N | A | -1.9257 | |
| 46 | G | A | -1.2332 | |
| 47 | K | A | -0.9395 | |
| 48 | V | A | 1.6822 | |
| 49 | V | A | 2.0683 | |
| 50 | V | A | 1.3076 | |
| 51 | P | A | 0.5039 | |
| 52 | K | A | -0.6004 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1280 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4801 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2884 | |
| 70 | K | A | -1.8055 | |
| 71 | F | A | -0.6617 | |
| 72 | A | A | -0.5742 | |
| 73 | L | A | -0.8666 | |
| 74 | P | A | -1.2675 | |
| 75 | Q | A | -2.4826 | |
| 76 | K | A | -3.0966 | |
| 77 | D | A | -2.9922 | |
| 78 | F | A | -1.6520 | |
| 79 | Y | A | -1.9311 | |
| 80 | D | A | -2.7712 | |
| 81 | P | A | -2.4190 | |
| 82 | E | A | -3.0798 | |
| 83 | K | A | -3.4477 | |
| 84 | E | A | -2.5106 | |
| 85 | R | A | -1.3195 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6413 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9545 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3595 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6600 | |
| 99 | G | A | -0.5092 | |
| 100 | P | A | -0.3786 | |
| 101 | L | A | 0.0885 | |
| 102 | G | A | -0.3121 | |
| 103 | K | A | -0.9424 | |
| 104 | G | A | -0.7103 | |
| 105 | S | A | -0.6648 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1048 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4178 | |
| 110 | L | A | 0.2927 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0978 | |
| 113 | K | A | -0.3811 | |
| 114 | L | A | -0.8734 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.7193 | |
| 117 | T | A | -1.5030 | |
| 118 | E | A | -2.5537 | |
| 119 | N | A | -2.6518 | |
| 120 | P | A | -2.2674 | |
| 121 | T | A | -1.8019 | |
| 122 | E | A | -2.4962 | |
| 123 | P | A | -1.2619 | |
| 124 | Q | A | -1.3306 | |
| 125 | H | A | -0.9027 | |
| 126 | C | A | -0.9416 | |
| 127 | G | A | -1.2736 | |
| 128 | P | A | -1.4035 | |
| 129 | D | A | -2.2953 | |
| 130 | D | A | -1.7682 | |
| 131 | R | A | -1.2018 | |
| 132 | V | A | 0.2024 | |
| 133 | A | A | 0.4379 | |
| 134 | F | A | 0.2667 | |
| 135 | S | A | -0.1208 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8573 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2655 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5711 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2275 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1903 | |
| 157 | D | A | 0.5251 | |
| 158 | L | A | 1.1605 | |
| 159 | A | A | 0.9495 | |
| 160 | P | A | 0.0924 | |
| 161 | P | A | 0.4479 | |
| 162 | C | A | 0.5081 | |
| 163 | P | A | 0.0056 | |
| 164 | G | A | -0.0892 | |
| 165 | L | A | 0.5689 | |
| 166 | P | A | -0.1152 | |
| 167 | P | A | -0.3401 | |
| 168 | G | A | -0.4213 | |
| 169 | A | A | -0.0232 | |
| 170 | C | A | 0.6611 | |
| 171 | P | A | 0.7527 | |
| 172 | P | A | 1.1230 | |
| 173 | I | A | 2.2864 | |
| 174 | Q | A | 1.2327 | |
| 175 | L | A | 1.5705 | |
| 176 | V | A | 0.8856 | |
| 177 | N | A | -0.3032 | |
| 178 | S | A | 0.0298 | |
| 179 | V | A | 0.4223 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3716 | |
| 182 | D | A | 0.0744 | |
| 183 | G | A | -0.1639 | |
| 184 | D | A | -0.5741 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4850 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0845 | |
| 190 | F | A | 0.0216 | |
| 191 | G | A | -0.1572 | |
| 192 | N | A | -0.3213 | |
| 193 | M | A | -0.1392 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4132 | |
| 197 | E | A | -2.6518 | |
| 198 | L | A | -1.2531 | |
| 199 | Q | A | -2.5549 | |
| 200 | Q | A | -3.3392 | |
| 201 | D | A | -3.6020 | |
| 202 | R | A | -3.3471 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1843 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3713 | |
| 211 | S | A | -1.9084 | |
| 212 | T | A | -1.4584 | |
| 213 | R | A | -2.1469 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2146 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2960 | |
| 220 | L | A | 0.5051 | |
| 221 | K | A | -1.2996 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9662 | |
| 224 | N | A | -1.5763 | |
| 225 | E | A | -1.3297 | |
| 226 | A | A | -0.6761 | |
| 227 | Y | A | -0.4553 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7104 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1375 | |
| 234 | F | A | 0.0315 | |
| 235 | G | A | -0.9245 | |
| 236 | R | A | -2.6887 | |
| 237 | R | A | -2.9820 | |
| 238 | E | A | -2.1798 | |
| 239 | Q | A | -0.1710 | |
| 240 | V | A | 1.5441 | |
| 241 | Y | A | 1.2239 | |
| 242 | A | A | 0.1270 | |
| 243 | R | A | -1.2367 | |
| 244 | H | A | -1.2497 | |
| 245 | F | A | -0.2573 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.3905 | |
| 249 | C | A | -0.8475 | |
| 250 | G | A | -0.8177 | |
| 251 | P | A | -0.8364 | |
| 252 | D | A | -1.2235 | |
| 253 | G | A | -1.2492 | |
| 254 | H | A | -1.3886 | |
| 255 | P | A | -1.1723 | |
| 256 | L | A | -0.3835 | |
| 257 | P | A | -0.8798 | |
| 258 | D | A | -1.9134 | |
| 259 | A | A | -0.8547 | |
| 260 | P | A | -0.9726 | |
| 261 | P | A | -0.6238 | |
| 262 | P | A | -0.3279 | |
| 263 | S | A | -0.1887 | |
| 264 | P | A | 0.4250 | |
| 265 | L | A | 1.4996 | |
| 266 | Y | A | 0.6234 | |
| 267 | T | A | -0.1113 | |
| 268 | P | A | -0.2963 | |
| 269 | P | A | 0.0038 | |
| 270 | P | A | -0.3801 | |
| 271 | P | A | -0.1410 | |
| 272 | S | A | -0.3148 | |
| 273 | S | A | 0.2481 | |
| 274 | P | A | 0.0665 | |
| 275 | Y | A | 1.0740 | |
| 276 | A | A | 0.8950 | |
| 277 | V | A | 1.4399 | |
| 278 | R | A | 0.1864 | |
| 279 | P | A | -0.2547 | |
| 280 | P | A | 0.0000 | |
| 281 | Y | A | -0.0709 | |
| 282 | D | A | -0.4478 | |
| 283 | Y | A | 1.0756 | |
| 284 | F | A | 0.7936 | |
| 285 | G | A | 0.1021 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8754 | |
| 291 | L | A | 1.5752 | |
| 292 | V | A | 0.5758 | |
| 293 | S | A | -0.1506 | |
| 294 | S | A | -0.9526 | |
| 295 | D | A | -1.8451 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1271 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6245 | |
| 301 | R | A | -1.8480 | |
| 302 | P | A | -0.9508 | |
| 303 | F | A | -0.1759 | |
| 304 | W | A | -0.5167 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0814 | |
| 307 | R | A | -2.9244 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6545 | |
| 310 | G | A | -1.4247 | |
| 311 | N | A | -1.4061 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9673 | |
| 319 | N | A | -0.8945 | |
| 320 | E | A | -1.0576 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3618 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2461 | |
| 333 | N | A | 0.3375 | |
| 334 | F | A | 1.4425 | |
| 335 | T | A | 0.7231 | |
| 336 | I | A | 0.3547 | |
| 337 | S | A | -1.0810 | |
| 338 | Q | A | -1.8660 | |
| 339 | Q | A | -1.7970 | |
| 340 | L | A | 0.1516 | |
| 341 | S | A | -0.1833 | |
| 342 | T | A | -0.3828 | |
| 343 | P | A | -0.7741 | |
| 344 | A | A | -0.7501 | |
| 345 | N | A | -1.2702 | |
| 346 | N | A | -0.8608 | |
| 347 | V | A | 1.1290 | |
| 348 | Y | A | 1.1494 | |
| 349 | D | A | -0.3630 | |
| 350 | P | A | -0.6984 | |
| 351 | S | A | -0.5432 | |
| 352 | N | A | -0.5756 | |
| 353 | F | A | -1.0520 | |
| 354 | K | A | -2.0242 | |
| 355 | N | A | -1.8373 | |
| 356 | Y | A | -0.1639 | |
| 357 | L | A | 0.5505 | |
| 358 | R | A | 0.9025 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4748 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | 0.0010 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9425 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6854 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3099 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3419 | |
| 376 | L | A | -1.7894 | |
| 377 | D | A | -2.0484 | |
| 378 | P | A | -0.9609 | |
| 379 | G | A | -0.8824 | |
| 380 | V | A | -0.8810 | |
| 381 | L | A | -0.2809 | |
| 382 | A | A | 0.0000 | |
| 383 | H | A | -0.5918 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.3437 | |
| 386 | T | A | 0.0033 | |
| 387 | M | A | -0.0928 | |
| 388 | N | A | -0.6154 | |
| 389 | P | A | -0.8401 | |
| 390 | T | A | -1.5002 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4687 | |
| 393 | E | A | -2.9718 | |
| 394 | N | A | -2.8936 | |
| 395 | W | A | -1.6347 | |
| 396 | N | A | -1.3003 | |
| 397 | L | A | -0.2553 | |
| 398 | G | A | 0.4891 | |
| 399 | F | A | 2.4142 | |
| 400 | V | A | 1.8449 | |
| 401 | P | A | 0.0538 | |
| 402 | P | A | -2.0387 | |
| 403 | K | A | -3.5723 | |
| 404 | E | A | -4.1270 | |
| 405 | R | A | -4.7085 | |
| 406 | E | A | -4.1325 | |
| 407 | D | A | -3.0191 | |
| 408 | P | A | -1.8478 | |
| 409 | Y | A | -0.9792 | |
| 410 | K | A | -2.0946 | |
| 411 | G | A | -0.6330 | |
| 412 | L | A | 0.6694 | |
| 413 | I | A | 1.5823 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4013 | |
| 416 | E | A | -1.6736 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8465 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8881 | |
| 421 | E | A | -2.4985 | |
| 422 | R | A | -2.0749 | |
| 423 | F | A | -1.0215 | |
| 424 | S | A | -1.3259 | |
| 425 | Q | A | -1.8603 | |
| 426 | D | A | -2.9096 | |
| 427 | L | A | -2.0269 | |
| 428 | D | A | -2.8434 | |
| 429 | Q | A | -2.6386 | |
| 430 | F | A | -1.4747 | |
| 431 | A | A | -0.9329 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6493 | |
| 435 | K | A | -0.7714 | |
| 436 | F | A | 0.1215 | |
| 437 | L | A | 1.0073 | |
| 438 | Y | A | 0.8047 | |
| 439 | Q | A | -0.2771 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine