| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAVSGLSLTSNSVNWIRQAPGKGLEWVGLIWSNGDTDYNSAIKSRFTISRDTSKSTVYLQMNSLRAEDTAVYYCAREYYGYFDYWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCLASEGISSTLAWYQQKPGKAPKLLIYGANSLQTGVPSRFSGSGSATDYTLTISSLQPEDFATYYCQQSYKFPNTFGQGTKVEVK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:30)
[INFO] Main: Simulation completed successfully. (00:01:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0695 | |
| 2 | V | H | -1.1292 | |
| 3 | Q | H | -1.2206 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.8366 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1966 | |
| 8 | G | H | -0.7044 | |
| 9 | G | H | 0.1348 | |
| 11 | G | H | 0.7758 | |
| 12 | L | H | 1.4003 | |
| 13 | V | H | -0.0656 | |
| 14 | Q | H | -1.3574 | |
| 15 | P | H | -1.6112 | |
| 16 | G | H | -1.3933 | |
| 17 | G | H | -1.1197 | |
| 18 | S | H | -0.9693 | |
| 19 | L | H | -0.6491 | |
| 20 | R | H | -1.5674 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2844 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0751 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.9541 | |
| 27 | G | H | -1.1766 | |
| 28 | L | H | -0.5334 | |
| 29 | S | H | -0.2625 | |
| 30 | L | H | 0.0000 | |
| 35 | T | H | -0.5665 | |
| 36 | S | H | -0.4954 | |
| 37 | N | H | -0.2585 | |
| 38 | S | H | 0.0000 | |
| 39 | V | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6014 | |
| 45 | A | H | -1.0114 | |
| 46 | P | H | -0.8165 | |
| 47 | G | H | -1.4724 | |
| 48 | K | H | -2.3647 | |
| 49 | G | H | -1.6222 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0302 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | L | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | W | H | -0.7479 | |
| 58 | S | H | -0.9979 | |
| 59 | N | H | -1.7799 | |
| 63 | G | H | -1.6528 | |
| 64 | D | H | -2.1750 | |
| 65 | T | H | -1.1757 | |
| 66 | D | H | -0.8813 | |
| 67 | Y | H | -0.5448 | |
| 68 | N | H | 0.0000 | |
| 69 | S | H | -0.7888 | |
| 70 | A | H | -0.4459 | |
| 71 | I | H | 0.0000 | |
| 72 | K | H | -1.5543 | |
| 74 | S | H | -1.0530 | |
| 75 | R | H | -1.0456 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7926 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.6175 | |
| 80 | R | H | -0.8354 | |
| 81 | D | H | -1.1142 | |
| 82 | T | H | -1.0327 | |
| 83 | S | H | -1.2242 | |
| 84 | K | H | -2.0168 | |
| 85 | S | H | -1.1711 | |
| 86 | T | H | -0.6569 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.4864 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0474 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.1977 | |
| 93 | S | H | -1.1601 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.4101 | |
| 96 | A | H | -1.7542 | |
| 97 | E | H | -2.2814 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3810 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7829 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0666 | |
| 107 | E | H | 0.3771 | |
| 108 | Y | H | 0.9448 | |
| 109 | Y | H | 1.4676 | |
| 113 | G | H | 0.6833 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | Y | H | 0.3606 | |
| 118 | W | H | -0.2439 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3894 | |
| 121 | G | H | -0.2660 | |
| 122 | T | H | 0.5681 | |
| 123 | L | H | 1.6723 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3566 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7437 | |
| 128 | S | H | -0.6895 | |
| 1 | D | L | -2.2814 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -1.8301 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5851 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.4389 | |
| 8 | P | L | -0.5928 | |
| 9 | S | L | -0.8304 | |
| 10 | S | L | -1.0202 | |
| 11 | L | L | -0.6494 | |
| 12 | S | L | -0.9087 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.2907 | |
| 15 | V | L | 0.5981 | |
| 16 | G | L | -0.6180 | |
| 17 | D | L | -1.3428 | |
| 18 | R | L | -2.1519 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6058 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.2468 | |
| 23 | C | L | 0.0000 | |
| 24 | L | L | -0.2213 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.1929 | |
| 27 | E | L | -1.3126 | |
| 28 | G | L | -0.6238 | |
| 29 | I | L | 0.0000 | |
| 36 | S | L | -0.4463 | |
| 37 | S | L | -0.6056 | |
| 38 | T | L | -0.0549 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8990 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.7562 | |
| 46 | P | L | -1.3114 | |
| 47 | G | L | -1.6539 | |
| 48 | K | L | -2.5985 | |
| 49 | A | L | -1.5645 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.2645 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1185 | |
| 56 | G | L | -0.3303 | |
| 57 | A | L | 0.0000 | |
| 65 | N | L | -1.3712 | |
| 66 | S | L | -0.4457 | |
| 67 | L | L | 0.0650 | |
| 68 | Q | L | -0.2359 | |
| 69 | T | L | -0.2298 | |
| 70 | G | L | -0.4955 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -0.3811 | |
| 74 | S | L | -0.4255 | |
| 75 | R | L | -0.8132 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6030 | |
| 78 | G | L | -0.7629 | |
| 79 | S | L | -1.0928 | |
| 80 | G | L | -1.0849 | |
| 83 | S | L | -0.9661 | |
| 84 | A | L | -0.6508 | |
| 85 | T | L | -0.8214 | |
| 86 | D | L | -1.2542 | |
| 87 | Y | L | 0.0000 | |
| 88 | T | L | -0.5892 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6295 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3250 | |
| 93 | S | L | -1.0487 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.5988 | |
| 96 | P | L | -0.7854 | |
| 97 | E | L | -1.7669 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.6243 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.0257 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.3204 | |
| 108 | Y | L | 0.3162 | |
| 109 | K | L | -0.9123 | |
| 114 | F | L | -0.1157 | |
| 115 | P | L | -0.3816 | |
| 116 | N | L | 0.0000 | |
| 117 | T | L | -0.7962 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7988 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.7300 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.3133 | |
| 126 | V | L | 0.4232 | |
| 127 | K | L | -1.0235 |