| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMAWFRQAPGKGRELVAAISSSGGYTYYADSVKGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAARSGGLTKESAFDESKYDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | C | -2.1379 | |
| 2 | V | C | -1.4700 | |
| 3 | Q | C | -1.3696 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.6623 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.5677 | |
| 8 | G | C | -1.1538 | |
| 9 | G | C | -0.8686 | |
| 10 | G | C | -0.0860 | |
| 11 | L | C | 0.8791 | |
| 12 | V | C | 0.0000 | |
| 13 | Q | C | -1.4123 | |
| 14 | P | C | -1.6276 | |
| 15 | G | C | -1.3743 | |
| 16 | G | C | -1.0095 | |
| 17 | S | C | -1.3417 | |
| 18 | L | C | -1.1511 | |
| 19 | R | C | -2.1854 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.4350 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.3010 | |
| 24 | A | C | 0.0000 | |
| 25 | S | C | -1.0943 | |
| 26 | G | C | -1.2417 | |
| 27 | F | C | -0.6008 | |
| 28 | T | C | -0.3127 | |
| 29 | F | C | 0.0000 | |
| 30 | S | C | -0.6701 | |
| 31 | S | C | -0.4694 | |
| 32 | Y | C | -0.5106 | |
| 33 | A | C | 0.0000 | |
| 34 | M | C | 0.0000 | |
| 35 | A | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | F | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -1.7172 | |
| 40 | A | C | -1.7114 | |
| 41 | P | C | -1.1512 | |
| 42 | G | C | -1.6612 | |
| 43 | K | C | -2.7185 | |
| 44 | G | C | -2.3020 | |
| 45 | R | C | -2.4242 | |
| 46 | E | C | -2.0151 | |
| 47 | L | C | 0.0000 | |
| 48 | V | C | 0.0000 | |
| 49 | A | C | 0.0000 | |
| 50 | A | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.1081 | |
| 53 | S | C | -0.4778 | |
| 54 | S | C | -0.4854 | |
| 55 | G | C | -0.3449 | |
| 56 | G | C | -0.0303 | |
| 57 | Y | C | 0.7560 | |
| 58 | T | C | 0.2467 | |
| 59 | Y | C | 0.0000 | |
| 60 | Y | C | -1.0128 | |
| 61 | A | C | -1.4613 | |
| 62 | D | C | -2.4779 | |
| 63 | S | C | -1.7193 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.6106 | |
| 66 | G | C | -1.7413 | |
| 67 | R | C | -1.5021 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.8566 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.2627 | |
| 72 | R | C | -1.0365 | |
| 73 | D | C | -1.5149 | |
| 74 | N | C | -1.7334 | |
| 75 | A | C | -1.4485 | |
| 76 | K | C | -2.3927 | |
| 77 | R | C | -2.0507 | |
| 78 | M | C | -1.0220 | |
| 79 | V | C | 0.0000 | |
| 80 | Y | C | -0.5121 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.2344 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.4639 | |
| 85 | S | C | -1.1899 | |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -2.2503 | |
| 88 | A | C | -1.7111 | |
| 89 | E | C | -2.2221 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.8391 | |
| 92 | A | C | 0.0000 | |
| 93 | V | C | -0.3842 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | -0.2555 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | A | C | 0.0000 | |
| 99 | R | C | -1.3138 | |
| 100 | S | C | -1.0624 | |
| 101 | G | C | -0.8996 | |
| 102 | G | C | -0.7872 | |
| 103 | L | C | 0.0000 | |
| 104 | T | C | -1.2891 | |
| 105 | K | C | -2.2111 | |
| 106 | E | C | -2.3572 | |
| 107 | S | C | -1.7330 | |
| 108 | A | C | 0.0000 | |
| 109 | F | C | -0.5631 | |
| 110 | D | C | -1.5381 | |
| 111 | E | C | -1.7343 | |
| 112 | S | C | -1.4920 | |
| 113 | K | C | -2.0445 | |
| 114 | Y | C | 0.0000 | |
| 115 | D | C | -1.9741 | |
| 116 | Y | C | -0.7144 | |
| 117 | W | C | -0.2472 | |
| 118 | G | C | -0.2277 | |
| 119 | Q | C | -1.0630 | |
| 120 | G | C | -0.5058 | |
| 121 | T | C | -0.7112 | |
| 122 | Q | C | -1.0695 | |
| 123 | V | C | 0.0000 | |
| 124 | T | C | -0.3294 | |
| 125 | V | C | 0.0000 | |
| 126 | S | C | -0.8131 | |
| 127 | S | C | -0.5319 |