| Chain sequence(s) |
H: QVQLVESGGGLVQAGGSLRLSCAVSGIDFSISTVVWYRQAPGKQRDWVATIARVGSTSYANSVKGRFTVSRDNVKNTAYLQMNSLKAEDTALYYCNTPPLIARDYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3367 | |
| 2 | V | H | -0.7773 | |
| 3 | Q | H | -0.7492 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.3315 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5562 | |
| 8 | G | H | -0.9072 | |
| 9 | G | H | -0.5138 | |
| 11 | G | H | 0.2628 | |
| 12 | L | H | 1.1746 | |
| 13 | V | H | 0.0503 | |
| 14 | Q | H | -1.2523 | |
| 15 | A | H | -1.6820 | |
| 16 | G | H | -1.3890 | |
| 17 | G | H | -1.1182 | |
| 18 | S | H | -1.1030 | |
| 19 | L | H | -0.7276 | |
| 20 | R | H | -1.5303 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2909 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2349 | |
| 25 | V | H | 0.0000 | |
| 26 | S | H | -0.9782 | |
| 27 | G | H | -1.0767 | |
| 28 | I | H | -0.5364 | |
| 29 | D | H | -0.9406 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.1450 | |
| 36 | I | H | 1.3371 | |
| 37 | S | H | 0.0000 | |
| 38 | T | H | 0.0857 | |
| 39 | V | H | 0.0000 | |
| 40 | V | H | 0.2218 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | -0.2103 | |
| 43 | R | H | -1.1966 | |
| 44 | Q | H | -1.9452 | |
| 45 | A | H | -1.9050 | |
| 46 | P | H | -1.2431 | |
| 47 | G | H | -1.7767 | |
| 48 | K | H | -3.1043 | |
| 49 | Q | H | -3.0488 | |
| 50 | R | H | -2.5687 | |
| 51 | D | H | -2.4286 | |
| 52 | W | H | -0.6085 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | -0.1356 | |
| 56 | I | H | 0.0000 | |
| 57 | A | H | -0.2379 | |
| 58 | R | H | -0.7479 | |
| 59 | V | H | 0.9197 | |
| 63 | G | H | -0.4769 | |
| 64 | S | H | -0.2552 | |
| 65 | T | H | -0.2437 | |
| 66 | S | H | -0.5248 | |
| 67 | Y | H | -0.7711 | |
| 68 | A | H | -1.1952 | |
| 69 | N | H | -1.9940 | |
| 70 | S | H | -1.5609 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4798 | |
| 74 | G | H | -1.7084 | |
| 75 | R | H | -1.6742 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7701 | |
| 78 | V | H | 0.0000 | |
| 79 | S | H | -0.5803 | |
| 80 | R | H | -1.3367 | |
| 81 | D | H | -1.7277 | |
| 82 | N | H | -1.9249 | |
| 83 | V | H | -0.0958 | |
| 84 | K | H | -1.7994 | |
| 85 | N | H | -1.6747 | |
| 86 | T | H | -0.9850 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3105 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8913 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2900 | |
| 93 | S | H | -1.2635 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.6486 | |
| 96 | A | H | -1.8710 | |
| 97 | E | H | -2.3631 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8453 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | -0.2684 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | T | H | 0.0000 | |
| 107 | P | H | -0.2057 | |
| 108 | P | H | 0.6137 | |
| 109 | L | H | 1.7943 | |
| 113 | I | H | 2.0545 | |
| 114 | A | H | 0.2898 | |
| 115 | R | H | -1.4432 | |
| 116 | D | H | -1.3747 | |
| 117 | Y | H | -0.6584 | |
| 118 | W | H | -0.0822 | |
| 119 | G | H | -0.1732 | |
| 120 | Q | H | -0.9591 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | -0.5913 | |
| 123 | Q | H | -0.5488 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1731 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7569 | |
| 128 | S | H | -0.8793 |