Project name: EP076_agg

Status: done

Started: 2026-07-26 03:59:12
Settings
Chain sequence(s) A: TCAASSGLMTKKNSTFC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:04)
Show buried residues

Minimal score value
-2.8117
Maximal score value
2.0528
Average score
-0.1049
Total score value
-1.7832

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 T A 0.4049
2 C A 0.0000
3 A A 0.9149
4 A A 0.5595
5 S A -0.0097
6 S A -0.2231
7 G A -0.0770
8 L A 0.1507
9 M A 0.7267
10 T A -0.7764
11 K A -2.2508
12 K A -2.8117
13 N A -2.0140
14 S A -0.3786
15 T A 0.8839
16 F A 2.0528
17 C A 1.0647
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Laboratory of Theory of Biopolymers 2018