| Chain sequence(s) |
A: NGLPVCGETCVGGTCNTPGCKCSWPVCTR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.1533 | |
| 2 | G | A | -0.1355 | |
| 3 | L | A | 1.4277 | |
| 4 | P | A | 1.3501 | |
| 5 | V | A | 1.5688 | |
| 6 | C | A | 0.3656 | |
| 7 | G | A | -0.6732 | |
| 8 | E | A | -1.3537 | |
| 9 | T | A | -0.0238 | |
| 10 | C | A | 0.0000 | |
| 11 | V | A | 1.2456 | |
| 12 | G | A | 0.1899 | |
| 13 | G | A | 0.1723 | |
| 14 | T | A | -0.0378 | |
| 15 | C | A | -0.5946 | |
| 16 | N | A | -1.6519 | |
| 17 | T | A | -1.2049 | |
| 18 | P | A | -0.9805 | |
| 19 | G | A | -1.3202 | |
| 20 | C | A | -1.6190 | |
| 21 | K | A | -2.1898 | |
| 22 | C | A | -1.0075 | |
| 23 | S | A | 0.1355 | |
| 24 | W | A | 1.2685 | |
| 25 | P | A | 0.7847 | |
| 26 | V | A | 0.6723 | |
| 27 | C | A | 0.0000 | |
| 28 | T | A | -0.5554 | |
| 29 | R | A | -2.0539 |