Project name: query_structure

Status: done

Started: 2026-03-17 00:16:53
Settings
Chain sequence(s) A: NGLPVCGETCVGGTCNTPGCKCSWPVCTR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:05)
Show buried residues

Minimal score value
-2.1898
Maximal score value
1.5688
Average score
-0.2543
Total score value
-7.374

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.1533
2 G A -0.1355
3 L A 1.4277
4 P A 1.3501
5 V A 1.5688
6 C A 0.3656
7 G A -0.6732
8 E A -1.3537
9 T A -0.0238
10 C A 0.0000
11 V A 1.2456
12 G A 0.1899
13 G A 0.1723
14 T A -0.0378
15 C A -0.5946
16 N A -1.6519
17 T A -1.2049
18 P A -0.9805
19 G A -1.3202
20 C A -1.6190
21 K A -2.1898
22 C A -1.0075
23 S A 0.1355
24 W A 1.2685
25 P A 0.7847
26 V A 0.6723
27 C A 0.0000
28 T A -0.5554
29 R A -2.0539
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Laboratory of Theory of Biopolymers 2018