| Chain sequence(s) |
A: MSHHHHHHSGPLPPPRNLYVIAYIPKEFDSNGDATSYEFYDVKVEKITQVSETKYKVEVKATSWENPEEIYNIELEVEIDPSASYREIKDKVREAFRKYFLSLQNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:45)
[INFO] Main: Simulation completed successfully. (00:03:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5554 | |
| 2 | S | A | -0.6228 | |
| 3 | H | A | -1.7368 | |
| 4 | H | A | -2.3596 | |
| 5 | H | A | -2.7349 | |
| 6 | H | A | -2.7915 | |
| 7 | H | A | -2.7389 | |
| 8 | H | A | -2.3356 | |
| 9 | S | A | -1.8737 | |
| 10 | G | A | -0.9676 | |
| 11 | P | A | -0.8830 | |
| 12 | L | A | -0.4857 | |
| 13 | P | A | -0.4623 | |
| 14 | P | A | -1.3970 | |
| 15 | P | A | -1.9918 | |
| 16 | R | A | -2.8463 | |
| 17 | N | A | -2.2755 | |
| 18 | L | A | 0.0000 | |
| 19 | Y | A | -0.3824 | |
| 20 | V | A | 0.0000 | |
| 21 | I | A | 0.3830 | |
| 22 | A | A | 0.0000 | |
| 23 | Y | A | 0.5688 | |
| 24 | I | A | 0.0000 | |
| 25 | P | A | -0.6763 | |
| 26 | K | A | -1.8522 | |
| 27 | E | A | -2.1286 | |
| 28 | F | A | -0.8068 | |
| 29 | D | A | -1.7661 | |
| 30 | S | A | -1.3883 | |
| 31 | N | A | -2.1389 | |
| 32 | G | A | -1.9572 | |
| 33 | D | A | -2.4316 | |
| 34 | A | A | -1.3649 | |
| 35 | T | A | -0.9484 | |
| 36 | S | A | -0.6635 | |
| 37 | Y | A | 0.3396 | |
| 38 | E | A | -0.2331 | |
| 39 | F | A | 0.7136 | |
| 40 | Y | A | 0.0000 | |
| 41 | D | A | 0.2183 | |
| 42 | V | A | 0.0000 | |
| 43 | K | A | -1.7844 | |
| 44 | V | A | 0.0000 | |
| 45 | E | A | -2.8941 | |
| 46 | K | A | -2.9203 | |
| 47 | I | A | -1.5292 | |
| 48 | T | A | -0.8413 | |
| 49 | Q | A | -1.0057 | |
| 50 | V | A | 0.2362 | |
| 51 | S | A | -0.8570 | |
| 52 | E | A | -2.3724 | |
| 53 | T | A | -2.1472 | |
| 54 | K | A | -2.2591 | |
| 55 | Y | A | 0.0000 | |
| 56 | K | A | -2.1697 | |
| 57 | V | A | 0.0000 | |
| 58 | E | A | -3.1119 | |
| 59 | V | A | 0.0000 | |
| 60 | K | A | -1.6698 | |
| 61 | A | A | 0.0000 | |
| 62 | T | A | -0.7350 | |
| 63 | S | A | 0.0000 | |
| 64 | W | A | -0.6088 | |
| 65 | E | A | -2.3177 | |
| 66 | N | A | -2.5853 | |
| 67 | P | A | -1.9773 | |
| 68 | E | A | -2.6005 | |
| 69 | E | A | -1.8871 | |
| 70 | I | A | 0.3027 | |
| 71 | Y | A | -0.1829 | |
| 72 | N | A | -1.7515 | |
| 73 | I | A | 0.0000 | |
| 74 | E | A | -3.0311 | |
| 75 | L | A | 0.0000 | |
| 76 | E | A | -2.8931 | |
| 77 | V | A | 0.0000 | |
| 78 | E | A | -3.1554 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -2.8911 | |
| 81 | P | A | -2.1616 | |
| 82 | S | A | -1.4591 | |
| 83 | A | A | -1.4303 | |
| 84 | S | A | -1.2162 | |
| 85 | Y | A | -0.7402 | |
| 86 | R | A | -2.8566 | |
| 87 | E | A | -3.3951 | |
| 88 | I | A | 0.0000 | |
| 89 | K | A | -2.7630 | |
| 90 | D | A | -3.9480 | |
| 91 | K | A | -3.7728 | |
| 92 | V | A | 0.0000 | |
| 93 | R | A | -2.6256 | |
| 94 | E | A | -3.3256 | |
| 95 | A | A | -2.8703 | |
| 96 | F | A | 0.0000 | |
| 97 | R | A | -1.6266 | |
| 98 | K | A | -2.0153 | |
| 99 | Y | A | -1.0908 | |
| 100 | F | A | 0.0000 | |
| 101 | L | A | -0.9761 | |
| 102 | S | A | -0.7958 | |
| 103 | L | A | -0.3254 | |
| 104 | Q | A | -1.4545 | |
| 105 | N | A | -1.6194 | |
| 106 | S | A | -0.8816 |