Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | LG45C,EM46C,WL47C,PR41C |
Energy difference between WT (input) and mutated protein (by FoldX) | 5.05298 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:25) [INFO] FoldX: Starting FoldX energy minimalization (00:01:11) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:36) [INFO] Main: Simulation completed successfully. (00:01:36) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | C | -2.0068 | |
2 | V | C | -0.9006 | |
3 | Q | C | -1.2218 | |
4 | L | C | 0.0000 | |
5 | V | C | 0.5875 | |
6 | E | C | 0.2434 | |
7 | S | C | -0.4096 | |
8 | G | C | -0.8147 | |
9 | G | C | 0.0115 | |
10 | G | C | 0.9274 | |
11 | L | C | 1.4457 | |
12 | V | C | -0.0349 | |
13 | Q | C | -1.3361 | |
14 | P | C | -1.4880 | |
15 | G | C | -1.4134 | |
16 | G | C | -0.9785 | |
17 | S | C | -1.2309 | |
18 | L | C | -0.9629 | |
19 | R | C | -2.1461 | |
20 | L | C | 0.0000 | |
21 | S | C | -0.5418 | |
22 | C | C | 0.0000 | |
23 | A | C | -0.2017 | |
24 | A | C | 0.0000 | |
25 | S | C | -0.2017 | |
26 | D | C | 0.0000 | |
27 | F | C | 1.5458 | |
28 | T | C | 0.2524 | |
29 | F | C | 0.0000 | |
30 | R | C | -2.0330 | |
31 | S | C | -0.8870 | |
32 | Y | C | -1.2169 | |
33 | E | C | -1.1328 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -1.2063 | |
40 | A | C | -1.9959 | |
41 | R | C | -2.9174 | mutated: PR41C |
42 | G | C | -2.4149 | |
43 | K | C | -2.9151 | |
44 | G | C | -1.9683 | |
45 | G | C | -0.8774 | mutated: LG45C |
46 | M | C | 0.0186 | mutated: EM46C |
47 | L | C | 0.9074 | mutated: WL47C |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.5397 | |
53 | G | C | -1.2461 | |
54 | S | C | -1.2292 | |
55 | G | C | -1.0822 | |
56 | G | C | -0.7347 | |
57 | S | C | -0.2413 | |
58 | T | C | 0.3438 | |
59 | Y | C | 0.9171 | |
60 | Y | C | -0.1101 | |
61 | A | C | -0.8085 | |
62 | D | C | -2.3002 | |
63 | S | C | -1.7025 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.3314 | |
66 | G | C | -1.6109 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.6340 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.5624 | |
72 | R | C | -1.3627 | |
73 | D | C | -1.9805 | |
74 | N | C | -2.1902 | |
75 | S | C | -1.7905 | |
76 | K | C | -2.3163 | |
77 | N | C | -1.6491 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | -0.6695 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.2336 | |
83 | M | C | 0.0000 | |
84 | N | C | -1.3326 | |
85 | S | C | -1.2322 | |
86 | L | C | 0.0000 | |
87 | R | C | -2.4694 | |
88 | A | C | -1.8849 | |
89 | E | C | -2.5231 | |
90 | D | C | 0.0000 | |
91 | T | C | 0.0000 | |
92 | A | C | 0.0000 | |
93 | I | C | 0.5573 | |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.5072 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | L | C | 0.0000 | |
100 | R | C | -3.1758 | |
101 | D | C | -3.3173 | |
102 | G | C | -2.0536 | |
103 | F | C | -1.1322 | |
104 | N | C | -2.3963 | |
105 | K | C | -3.1646 | |
106 | G | C | -1.8863 | |
107 | F | C | -0.9355 | |
108 | D | C | -1.0681 | |
109 | Y | C | -0.1448 | |
110 | W | C | 0.6965 | |
111 | G | C | 0.0052 | |
112 | Q | C | -0.8412 | |
113 | G | C | 0.1235 | |
114 | T | C | 0.5876 | |
115 | L | C | 1.7519 | |
116 | V | C | 0.0000 | |
117 | T | C | 0.3493 | |
118 | V | C | 0.0000 | |
119 | S | C | -0.7725 | |
120 | S | C | -1.0588 |