Project name: query_structure

Status: done

Started: 2026-03-17 01:17:08
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDVSNTPHGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTRPRIGLPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:42)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:43)
Show buried residues

Minimal score value
-2.8298
Maximal score value
1.907
Average score
-0.5158
Total score value
-46.9414

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.5012
2 S A 0.6785
3 D A 0.4036
4 V A 0.6545
5 P A 0.0000
6 R A -2.0884
7 D A -2.8298
8 L A 0.0000
9 E A -2.0097
10 V A 0.0775
11 V A 1.5361
12 A A 0.8957
13 A A 0.3002
14 T A -0.5318
15 P A -1.1369
16 T A -1.0062
17 S A -0.5349
18 L A 0.0000
19 L A 0.7430
20 I A 0.0000
21 S A -0.8443
22 W A 0.0000
23 D A -2.1033
24 V A -0.5909
25 S A 0.0000
26 N A -1.0554
27 T A -0.4754
28 P A -0.4965
29 H A 0.0000
30 G A -0.4738
31 Y A -0.0794
32 Y A 0.0000
33 R A -0.5638
34 I A 0.0000
35 T A -0.5383
36 Y A -0.2873
37 G A 0.0000
38 E A -1.5628
39 T A -1.2858
40 G A -1.2608
41 G A -1.4015
42 N A -1.5350
43 S A -0.8080
44 P A -0.2832
45 V A 0.4920
46 Q A -0.7640
47 E A -1.6263
48 F A -0.6969
49 T A -0.2660
50 V A 0.0000
51 P A -0.6984
52 G A -0.5402
53 S A -0.8879
54 K A -1.6248
55 S A -0.8933
56 T A -0.5404
57 A A 0.0000
58 T A 0.2337
59 I A 0.0000
60 S A -0.6586
61 G A -1.0315
62 L A 0.0000
63 K A -2.3934
64 P A -1.6914
65 G A -1.4827
66 V A -1.5207
67 D A -2.2161
68 Y A 0.0000
69 T A -0.8024
70 I A 0.0000
71 T A -0.1736
72 V A 0.0000
73 Y A 0.8860
74 A A 0.0000
75 V A 0.2626
76 T A 0.0000
77 T A -1.0446
78 R A -2.1704
79 P A -1.2855
80 R A -1.0503
81 I A 1.3581
82 G A 0.0000
83 L A 1.9070
84 P A 1.0697
85 I A 0.3231
86 S A -0.3362
87 I A -0.7217
88 N A -1.7427
89 Y A -1.4949
90 R A -2.5816
91 T A -1.5442
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Laboratory of Theory of Biopolymers 2018