| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDVSNTPHGYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTTRPRIGLPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.5012 | |
| 2 | S | A | 0.6785 | |
| 3 | D | A | 0.4036 | |
| 4 | V | A | 0.6545 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -2.0884 | |
| 7 | D | A | -2.8298 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.0097 | |
| 10 | V | A | 0.0775 | |
| 11 | V | A | 1.5361 | |
| 12 | A | A | 0.8957 | |
| 13 | A | A | 0.3002 | |
| 14 | T | A | -0.5318 | |
| 15 | P | A | -1.1369 | |
| 16 | T | A | -1.0062 | |
| 17 | S | A | -0.5349 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7430 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.8443 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -2.1033 | |
| 24 | V | A | -0.5909 | |
| 25 | S | A | 0.0000 | |
| 26 | N | A | -1.0554 | |
| 27 | T | A | -0.4754 | |
| 28 | P | A | -0.4965 | |
| 29 | H | A | 0.0000 | |
| 30 | G | A | -0.4738 | |
| 31 | Y | A | -0.0794 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.5638 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5383 | |
| 36 | Y | A | -0.2873 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5628 | |
| 39 | T | A | -1.2858 | |
| 40 | G | A | -1.2608 | |
| 41 | G | A | -1.4015 | |
| 42 | N | A | -1.5350 | |
| 43 | S | A | -0.8080 | |
| 44 | P | A | -0.2832 | |
| 45 | V | A | 0.4920 | |
| 46 | Q | A | -0.7640 | |
| 47 | E | A | -1.6263 | |
| 48 | F | A | -0.6969 | |
| 49 | T | A | -0.2660 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.6984 | |
| 52 | G | A | -0.5402 | |
| 53 | S | A | -0.8879 | |
| 54 | K | A | -1.6248 | |
| 55 | S | A | -0.8933 | |
| 56 | T | A | -0.5404 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2337 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6586 | |
| 61 | G | A | -1.0315 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3934 | |
| 64 | P | A | -1.6914 | |
| 65 | G | A | -1.4827 | |
| 66 | V | A | -1.5207 | |
| 67 | D | A | -2.2161 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.8024 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.1736 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | 0.8860 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.2626 | |
| 76 | T | A | 0.0000 | |
| 77 | T | A | -1.0446 | |
| 78 | R | A | -2.1704 | |
| 79 | P | A | -1.2855 | |
| 80 | R | A | -1.0503 | |
| 81 | I | A | 1.3581 | |
| 82 | G | A | 0.0000 | |
| 83 | L | A | 1.9070 | |
| 84 | P | A | 1.0697 | |
| 85 | I | A | 0.3231 | |
| 86 | S | A | -0.3362 | |
| 87 | I | A | -0.7217 | |
| 88 | N | A | -1.7427 | |
| 89 | Y | A | -1.4949 | |
| 90 | R | A | -2.5816 | |
| 91 | T | A | -1.5442 |