| Chain sequence(s) |
A: MYRMQLLSCIALSLALVTNSAPTSSSTKKTQLQLEHLLLDLQMVILNGINNYKNPKLTRMLTFKFYMPKKATELKHLQCLEEELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADEKTATIVEFLNRWITFCQSIISTLT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:30)
[INFO] Main: Simulation completed successfully. (00:04:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.3438 | |
| 2 | Y | A | 0.9863 | |
| 3 | R | A | -0.5379 | |
| 4 | M | A | 0.3737 | |
| 5 | Q | A | 0.0409 | |
| 6 | L | A | 1.5953 | |
| 7 | L | A | 2.0439 | |
| 8 | S | A | 1.2718 | |
| 9 | C | A | 2.3306 | |
| 10 | I | A | 3.0201 | |
| 11 | A | A | 2.0376 | |
| 12 | L | A | 2.2044 | |
| 13 | S | A | 1.2193 | |
| 14 | L | A | 2.0219 | |
| 15 | A | A | 1.6839 | |
| 16 | L | A | 2.4570 | |
| 17 | V | A | 2.3078 | |
| 18 | T | A | 0.4592 | |
| 19 | N | A | -0.9989 | |
| 20 | S | A | -0.6550 | |
| 21 | A | A | -0.3047 | |
| 22 | P | A | -0.2633 | |
| 23 | T | A | -0.4143 | |
| 24 | S | A | -0.2718 | |
| 25 | S | A | -0.9098 | |
| 26 | S | A | -1.3637 | |
| 27 | T | A | -1.4697 | |
| 28 | K | A | -2.4903 | |
| 29 | K | A | -2.5757 | |
| 30 | T | A | -1.7175 | |
| 31 | Q | A | -1.2933 | |
| 32 | L | A | -0.8220 | |
| 33 | Q | A | -1.0442 | |
| 34 | L | A | 0.0000 | |
| 35 | E | A | -0.9756 | |
| 36 | H | A | -0.6314 | |
| 37 | L | A | 0.0000 | |
| 38 | L | A | 0.0000 | |
| 39 | L | A | 0.7401 | |
| 40 | D | A | 0.2773 | |
| 41 | L | A | 0.0000 | |
| 42 | Q | A | 0.3195 | |
| 43 | M | A | 0.8616 | |
| 44 | V | A | 0.7513 | |
| 45 | I | A | 0.0000 | |
| 46 | L | A | -0.2556 | |
| 47 | N | A | -0.6027 | |
| 48 | G | A | -0.3709 | |
| 49 | I | A | 0.0000 | |
| 50 | N | A | -1.4608 | |
| 51 | N | A | -1.5299 | |
| 52 | Y | A | -0.5348 | |
| 53 | K | A | -1.5563 | |
| 54 | N | A | 0.0000 | |
| 55 | P | A | -0.9204 | |
| 56 | K | A | -1.1712 | |
| 57 | L | A | -0.6546 | |
| 58 | T | A | -0.7316 | |
| 59 | R | A | -1.6541 | |
| 60 | M | A | 0.0000 | |
| 61 | L | A | -0.2381 | |
| 62 | T | A | -0.3881 | |
| 63 | F | A | -0.4858 | |
| 64 | K | A | -1.5782 | |
| 65 | F | A | 0.0000 | |
| 66 | Y | A | -0.8266 | |
| 67 | M | A | 0.0000 | |
| 68 | P | A | 0.0000 | |
| 69 | K | A | -3.3810 | |
| 70 | K | A | -2.8498 | |
| 71 | A | A | -1.8307 | |
| 72 | T | A | -1.0753 | |
| 73 | E | A | -1.0099 | |
| 74 | L | A | -0.4888 | |
| 75 | K | A | -0.8239 | |
| 76 | H | A | 0.0000 | |
| 77 | L | A | 0.0000 | |
| 78 | Q | A | -0.8593 | |
| 79 | C | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | E | A | -1.0481 | |
| 82 | E | A | -1.9251 | |
| 83 | E | A | 0.0000 | |
| 84 | L | A | 0.0000 | |
| 85 | K | A | -3.0346 | |
| 86 | P | A | -2.0833 | |
| 87 | L | A | 0.0000 | |
| 88 | E | A | -2.9460 | |
| 89 | E | A | -2.9213 | |
| 90 | V | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | N | A | -1.9480 | |
| 93 | L | A | 0.0000 | |
| 94 | A | A | -1.2675 | |
| 95 | Q | A | -1.7084 | |
| 96 | S | A | -1.6180 | |
| 97 | K | A | -2.1428 | |
| 98 | N | A | -1.3462 | |
| 99 | F | A | 0.6158 | |
| 100 | H | A | -0.3054 | |
| 101 | L | A | 0.0246 | |
| 102 | R | A | 0.0000 | |
| 103 | P | A | -1.6220 | |
| 104 | R | A | -3.6019 | |
| 105 | D | A | -3.0193 | |
| 106 | L | A | 0.0000 | |
| 107 | I | A | 0.0000 | |
| 108 | S | A | -1.6078 | |
| 109 | N | A | -1.4848 | |
| 110 | I | A | 0.0000 | |
| 111 | N | A | -0.4548 | |
| 112 | V | A | 0.9506 | |
| 113 | I | A | 0.2227 | |
| 114 | V | A | 0.0000 | |
| 115 | L | A | 0.2640 | |
| 116 | E | A | -0.9440 | |
| 117 | L | A | -0.6654 | |
| 118 | K | A | 0.0000 | |
| 119 | G | A | -1.2392 | |
| 120 | S | A | 0.0000 | |
| 121 | E | A | -1.7168 | |
| 122 | T | A | -0.8327 | |
| 123 | T | A | -0.1787 | |
| 124 | F | A | -0.0681 | |
| 125 | M | A | 0.4213 | |
| 126 | C | A | -1.0017 | |
| 127 | E | A | -2.0044 | |
| 128 | Y | A | -1.7702 | |
| 129 | A | A | -2.6690 | |
| 130 | D | A | -3.0764 | |
| 131 | E | A | -3.1251 | |
| 132 | K | A | -2.2599 | |
| 133 | T | A | -1.6701 | |
| 134 | A | A | 0.0000 | |
| 135 | T | A | -0.8193 | |
| 136 | I | A | 0.0000 | |
| 137 | V | A | -0.9137 | |
| 138 | E | A | -2.2822 | |
| 139 | F | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | N | A | -1.7896 | |
| 142 | R | A | -1.8460 | |
| 143 | W | A | 0.0000 | |
| 144 | I | A | -0.7734 | |
| 145 | T | A | -0.9937 | |
| 146 | F | A | 0.0000 | |
| 147 | C | A | 0.0000 | |
| 148 | Q | A | -1.3889 | |
| 149 | S | A | -0.8343 | |
| 150 | I | A | 0.0000 | |
| 151 | I | A | -0.4436 | |
| 152 | S | A | -0.4630 | |
| 153 | T | A | -0.1690 | |
| 154 | L | A | -0.0328 | |
| 155 | T | A | -0.2037 |