| Chain sequence(s) |
A: QYQLVESGGGLVQPGGSLRLSCAASGFTFSNYAMGWFRQAPGQGLEAVAAISSGGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGSGWGRVYGYNYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.2217 | |
| 2 | Y | A | -0.3398 | |
| 3 | Q | A | -0.6843 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.2237 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.1409 | |
| 8 | G | A | -0.6306 | |
| 9 | G | A | 0.1479 | |
| 10 | G | A | 0.6733 | |
| 11 | L | A | 1.3923 | |
| 12 | V | A | -0.1130 | |
| 13 | Q | A | -1.4454 | |
| 14 | P | A | -1.8051 | |
| 15 | G | A | -1.5382 | |
| 16 | G | A | -1.0072 | |
| 17 | S | A | -1.2795 | |
| 18 | L | A | -0.8922 | |
| 19 | R | A | -2.1252 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3474 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1244 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.7694 | |
| 26 | G | A | -0.7748 | |
| 27 | F | A | -0.4591 | |
| 28 | T | A | -0.5829 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.2943 | |
| 31 | N | A | -1.4767 | |
| 32 | Y | A | -0.6090 | |
| 33 | A | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.4267 | |
| 40 | A | A | -0.8422 | |
| 41 | P | A | -0.9622 | |
| 42 | G | A | -1.2209 | |
| 43 | Q | A | -1.6773 | |
| 44 | G | A | -0.8914 | |
| 45 | L | A | 0.2727 | |
| 46 | E | A | -0.4244 | |
| 47 | A | A | 0.2580 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | -0.0135 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | -0.7546 | |
| 53 | S | A | -0.9292 | |
| 54 | G | A | -1.1133 | |
| 55 | G | A | -0.9570 | |
| 56 | G | A | -0.8356 | |
| 57 | S | A | -0.5475 | |
| 58 | T | A | -0.0338 | |
| 59 | Y | A | 0.2223 | |
| 60 | Y | A | -0.5875 | |
| 61 | A | A | 0.0000 | |
| 62 | D | A | -2.4163 | |
| 63 | S | A | -1.8095 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5421 | |
| 66 | G | A | -1.7599 | |
| 67 | R | A | -1.7151 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.7771 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.3974 | |
| 72 | R | A | -1.2205 | |
| 73 | D | A | -1.8831 | |
| 74 | N | A | -2.3162 | |
| 75 | S | A | -1.8350 | |
| 76 | K | A | -2.6075 | |
| 77 | N | A | -2.0943 | |
| 78 | T | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.6139 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2468 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.5019 | |
| 85 | S | A | -1.4178 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.9447 | |
| 88 | A | A | -2.0248 | |
| 89 | E | A | -2.4547 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.4874 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.9683 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.5323 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | K | A | 0.0000 | |
| 99 | D | A | 0.0000 | |
| 100 | G | A | -0.8215 | |
| 101 | S | A | -0.7973 | |
| 102 | G | A | -0.5462 | |
| 103 | W | A | 0.2231 | |
| 104 | G | A | -0.5985 | |
| 105 | R | A | -1.1921 | |
| 106 | V | A | 0.3537 | |
| 107 | Y | A | 0.5992 | |
| 108 | G | A | -0.2998 | |
| 109 | Y | A | -0.3466 | |
| 110 | N | A | -0.8510 | |
| 111 | Y | A | 0.0943 | |
| 112 | W | A | 0.3866 | |
| 113 | G | A | 0.1563 | |
| 114 | Q | A | -0.7850 | |
| 115 | G | A | 0.2037 | |
| 116 | T | A | 0.7072 | |
| 117 | L | A | 1.7724 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | 0.3249 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | -0.7630 | |
| 122 | S | A | -0.5023 |