| Chain sequence(s) |
A: KLPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGSVITVERDDNPPPIR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:38)
[INFO] Main: Simulation completed successfully. (00:01:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 80 | K | A | -0.9972 | |
| 81 | L | A | 0.4046 | |
| 82 | P | A | -0.6499 | |
| 83 | A | A | -2.0917 | |
| 84 | K | A | -2.9807 | |
| 85 | R | A | -3.5705 | |
| 86 | Y | A | -2.2028 | |
| 87 | R | A | -2.1764 | |
| 88 | I | A | 0.0000 | |
| 89 | T | A | -1.6816 | |
| 90 | M | A | 0.0000 | |
| 91 | K | A | -1.9611 | |
| 92 | N | A | -1.5426 | |
| 93 | L | A | -1.1646 | |
| 94 | P | A | -1.3062 | |
| 95 | E | A | -1.3964 | |
| 96 | G | A | -0.8579 | |
| 97 | C | A | 0.0000 | |
| 98 | S | A | -0.8326 | |
| 99 | W | A | -0.0448 | |
| 100 | Q | A | -1.5222 | |
| 101 | D | A | -2.1523 | |
| 102 | L | A | 0.0000 | |
| 103 | K | A | -2.5408 | |
| 104 | D | A | -3.4042 | |
| 105 | L | A | -2.4504 | |
| 106 | A | A | 0.0000 | |
| 107 | R | A | -4.1846 | |
| 108 | E | A | -3.5461 | |
| 109 | N | A | -2.5513 | |
| 110 | S | A | -2.0988 | |
| 111 | L | A | 0.0000 | |
| 112 | E | A | -3.0241 | |
| 113 | T | A | 0.0000 | |
| 114 | T | A | -0.1958 | |
| 115 | F | A | 0.6272 | |
| 116 | S | A | 0.4284 | |
| 117 | S | A | 0.1598 | |
| 118 | V | A | -0.4008 | |
| 119 | N | A | -2.0295 | |
| 120 | T | A | -1.9540 | |
| 121 | R | A | -2.5844 | |
| 122 | D | A | -1.9808 | |
| 123 | F | A | -0.4205 | |
| 124 | D | A | -2.1936 | |
| 125 | G | A | -1.8323 | |
| 126 | T | A | -1.4082 | |
| 127 | G | A | 0.0000 | |
| 128 | A | A | -0.6661 | |
| 129 | L | A | 0.0000 | |
| 130 | E | A | -1.1576 | |
| 131 | F | A | 0.0000 | |
| 132 | P | A | -1.1928 | |
| 133 | S | A | -1.8059 | |
| 134 | E | A | -3.0387 | |
| 135 | E | A | -2.7185 | |
| 136 | I | A | -2.4450 | |
| 137 | L | A | 0.0000 | |
| 138 | V | A | -2.3060 | |
| 139 | E | A | -3.4115 | |
| 140 | A | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | E | A | -3.6979 | |
| 143 | R | A | -3.5056 | |
| 144 | L | A | 0.0000 | |
| 145 | N | A | -2.9210 | |
| 146 | N | A | -2.1325 | |
| 147 | I | A | -1.0283 | |
| 148 | E | A | -1.1960 | |
| 149 | F | A | -0.1072 | |
| 150 | R | A | -1.5556 | |
| 151 | G | A | -0.9825 | |
| 152 | S | A | -0.7395 | |
| 153 | V | A | -0.3434 | |
| 154 | I | A | 0.0000 | |
| 155 | T | A | -1.9178 | |
| 156 | V | A | 0.0000 | |
| 157 | E | A | -3.1170 | |
| 158 | R | A | -3.6508 | |
| 159 | D | A | -3.2548 | |
| 160 | D | A | -2.8523 | |
| 161 | N | A | -2.5600 | |
| 162 | P | A | -1.4858 | |
| 163 | P | A | -0.6659 | |
| 164 | P | A | -0.1834 | |
| 165 | I | A | 0.9021 | |
| 166 | R | A | -0.9813 |