Project name: fc0648363d9bf92

Status: done

Started: 2025-06-03 05:11:41
Settings
Chain sequence(s) H: EVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQRLEWMGMIHPNSGSTNYNEKFKGRVTITRDTSASTAYMELSSLRSEDTAVYYCARLKTGNSFDYWGQGTTVTVSS
L: DIVLTQSPDSLAVSLGERATINCKSSQSLLNSGNQKNYLTWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNAYTYPFTFGQGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:16)
Show buried residues

Minimal score value
-3.3444
Maximal score value
0.8338
Average score
-0.6669
Total score value
-154.0516

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1649
2 V H -1.3219
3 Q H -1.4045
4 L H 0.0000
5 V H 0.7533
6 Q H 0.0000
7 S H -0.5019
8 G H -0.5704
9 A H -0.0648
11 E H -0.2064
12 V H 0.8338
13 K H -0.9915
14 K H -2.1482
15 P H -2.1532
16 G H -1.4900
17 A H -1.2290
18 S H -1.4053
19 V H 0.0000
20 K H -2.0530
21 V H 0.0000
22 S H -0.5609
23 C H 0.0000
24 K H -0.7706
25 A H 0.0000
26 S H -0.9361
27 G H -1.2690
28 Y H -0.5293
29 T H -0.2206
30 F H 0.0000
35 T H -0.7887
36 S H -0.3707
37 Y H 0.0777
38 W H 0.0785
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7769
45 A H -1.1332
46 P H -0.9147
47 G H -1.3933
48 Q H -2.0667
49 R H -1.8238
50 L H 0.0000
51 E H -0.9264
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 M H 0.0000
56 I H 0.0000
57 H H -0.7779
58 P H 0.0000
59 N H -1.6196
62 S H -1.0857
63 G H -0.9374
64 S H -0.7241
65 T H -0.5278
66 N H -1.1633
67 Y H -1.5321
68 N H -2.2085
69 E H -3.3444
70 K H -3.2259
71 F H 0.0000
72 K H -3.2515
74 G H -2.0051
75 R H -1.6152
76 V H 0.0000
77 T H -0.9685
78 I H 0.0000
79 T H -0.7337
80 R H -1.2665
81 D H -1.2834
82 T H -0.8811
83 S H -0.5211
84 A H -0.6203
85 S H -0.7216
86 T H 0.0000
87 A H 0.0000
88 Y H -0.7752
89 M H 0.0000
90 E H -1.4343
91 L H 0.0000
92 S H -1.1514
93 S H -1.1582
94 L H 0.0000
95 R H -2.7002
96 S H -2.1836
97 E H -2.4149
98 D H 0.0000
99 T H -0.8214
100 A H 0.0000
101 V H 0.2260
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 L H 0.0669
108 K H -0.3604
109 T H -0.3003
110 G H -0.3217
113 N H -0.2082
114 S H 0.0000
115 F H 0.0000
116 D H -0.1543
117 Y H 0.0564
118 W H -0.0614
119 G H 0.0000
120 Q H -1.0795
121 G H -0.4784
122 T H 0.0000
123 T H 0.0309
124 V H 0.0000
125 T H -0.3090
126 V H 0.0000
127 S H -0.8578
128 S H -0.7766
1 D L -1.4835
2 I L 0.0000
3 V L 0.5810
4 L L 0.0000
5 T L -0.6804
6 Q L 0.0000
7 S L -1.1885
8 P L -1.3418
9 D L -2.3219
10 S L -1.5966
11 L L -0.8231
12 A L -0.4600
13 V L -0.9256
14 S L -0.9269
15 L L 0.0711
16 G L -1.0262
17 E L -2.6136
18 R L -2.6992
19 A L 0.0000
20 T L -0.5903
21 I L 0.0000
22 N L -1.3156
23 C L 0.0000
24 K L -2.0333
25 S L 0.0000
26 S L -0.9764
27 Q L -1.5080
28 S L -0.9241
29 L L 0.0000
30 L L -0.4875
31 N L -1.0038
32 S L -1.2010
33 G L -1.3249
34 N L -1.6874
35 Q L -2.0109
36 K L -1.4464
37 N L 0.0000
38 Y L 0.1029
39 L L 0.0000
40 T L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.7672
45 K L -1.2426
46 P L -0.8090
47 G L -1.2422
48 Q L -1.5938
49 P L -1.0049
50 P L 0.0000
51 K L -0.8740
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.1127
56 W L -0.2191
57 A L 0.0000
65 S L -0.5490
66 T L -0.4407
67 R L -1.2274
68 E L -1.0364
69 S L -0.7092
70 G L -0.9789
71 V L 0.0000
72 P L -1.3981
74 D L -2.2465
75 R L -1.5892
76 F L 0.0000
77 S L -0.8861
78 G L -0.4606
79 S L -0.6853
80 G L -1.0520
83 S L -1.0508
84 G L -1.0583
85 T L -1.4707
86 D L -2.1415
87 F L 0.0000
88 T L -0.8748
89 L L 0.0000
90 T L -0.6528
91 I L 0.0000
92 S L -1.7828
93 S L -1.6532
94 L L 0.0000
95 Q L -0.9904
96 A L -0.6425
97 E L -1.8525
98 D L 0.0000
99 V L -0.5315
100 A L 0.0000
101 V L -0.5008
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 N L 0.0000
107 A L 0.0000
108 Y L 0.6571
109 T L 0.1653
114 Y L 0.0098
115 P L -0.5470
116 F L 0.0000
117 T L 0.0063
118 F L 0.0000
119 G L 0.0000
120 Q L -1.2198
121 G L 0.0000
122 T L 0.0000
123 K L -1.9142
124 L L 0.0000
125 E L -0.8038
126 I L -0.2559
127 K L -1.3561
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Laboratory of Theory of Biopolymers 2018