| Chain sequence(s) |
A: KDGPFCMFDVSSFNQTQAWKYGYPFKDLHSRNYLYDRSLWNSVCLEPSAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.9294 | |
| 2 | D | A | -2.8872 | |
| 3 | G | A | -1.4149 | |
| 4 | P | A | -0.4560 | |
| 5 | F | A | 0.9191 | |
| 6 | C | A | 0.0000 | |
| 7 | M | A | 0.1008 | |
| 8 | F | A | -0.0512 | |
| 9 | D | A | -1.2702 | |
| 10 | V | A | -0.2537 | |
| 11 | S | A | -0.6944 | |
| 12 | S | A | -0.2973 | |
| 13 | F | A | 0.6532 | |
| 14 | N | A | -1.1781 | |
| 15 | Q | A | -1.6182 | |
| 16 | T | A | -1.2178 | |
| 17 | Q | A | -1.4583 | |
| 18 | A | A | -0.8352 | |
| 19 | W | A | -0.2477 | |
| 20 | K | A | -0.7550 | |
| 21 | Y | A | 0.5638 | |
| 22 | G | A | 0.4898 | |
| 23 | Y | A | -0.2314 | |
| 24 | P | A | -0.4501 | |
| 25 | F | A | 0.0000 | |
| 26 | K | A | -3.1960 | |
| 27 | D | A | -2.6333 | |
| 28 | L | A | -1.4171 | |
| 29 | H | A | -1.7853 | |
| 30 | S | A | -1.9474 | |
| 31 | R | A | -3.2666 | |
| 32 | N | A | -1.9904 | |
| 33 | Y | A | 0.0000 | |
| 34 | L | A | -1.3218 | |
| 35 | Y | A | -0.2125 | |
| 36 | D | A | -1.7386 | |
| 37 | R | A | -2.2060 | |
| 38 | S | A | -1.3720 | |
| 39 | L | A | -0.6171 | |
| 40 | W | A | -0.7126 | |
| 41 | N | A | -1.7092 | |
| 42 | S | A | -0.4372 | |
| 43 | V | A | -0.0043 | |
| 44 | C | A | 0.0000 | |
| 45 | L | A | -0.3574 | |
| 46 | E | A | -1.4503 | |
| 47 | P | A | -0.6297 | |
| 48 | S | A | -0.0981 | |
| 49 | A | A | -0.0732 | |
| 50 | A | A | 0.1262 |