Project name: ABTZMAN5

Status: done

Started: 2026-02-25 07:42:59
Settings
Chain sequence(s) H: QVQLQQSGGELAKPGASVKVSCKASGYTFSSFWMHWVRQAPGQGLEWIGYINPRSGYTEYNEIFRDKATMTTDTSTSTAYMELSSLRSEDTAVYYCASFLGRGAMDYWGQGTTVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQDISNYLAWYQQKPGKAPKLLIYYTSKIHSGVPSRFSGSGSGTDYTFTISSLQPEDIATYYCQQGNTFPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:01)
Show buried residues

Minimal score value
-2.1652
Maximal score value
1.689
Average score
-0.2559
Total score value
-57.588

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.2090
2 V H -0.2834
3 Q H -1.1613
4 L H 0.0000
5 Q H -1.1983
6 Q H 0.0000
7 S H -0.1360
8 G H -0.5612
9 G H -0.6248
11 E H -0.1651
12 L H 1.4825
13 A H -0.0200
14 K H -1.7293
15 P H -0.5005
16 G H -0.5127
17 A H -0.1104
18 S H -0.1813
19 V H -0.1270
20 K H -1.7696
21 V H 0.0000
22 S H -0.0071
23 C H 0.0000
24 K H -1.1561
25 A H 0.0000
26 S H -0.2013
27 G H -0.5470
28 Y H 0.1249
29 T H -0.0309
30 F H 0.0000
35 S H -0.3054
36 S H -0.0505
37 F H 0.5817
38 W H 0.4721
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H -0.2589
44 Q H -0.1701
45 A H 0.0000
46 P H -0.3390
47 G H -0.7265
48 Q H -1.2995
49 G H -0.3167
50 L H 0.0000
51 E H -0.3902
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Y H 0.0000
56 I H 0.0000
57 N H -0.1781
58 P H 0.0000
59 R H -1.8894
62 S H -0.6241
63 G H -0.2448
64 Y H 1.2328
65 T H 0.1241
66 E H -0.4777
67 Y H 0.1480
68 N H 0.0000
69 E H -1.4621
70 I H 1.6890
71 F H 0.0000
72 R H -2.1652
74 D H -2.1574
75 K H -0.5278
76 A H 0.0000
77 T H -0.0588
78 M H 0.0000
79 T H -0.0323
80 T H -0.1047
81 D H -0.4888
82 T H -0.2000
83 S H -0.2364
84 T H -0.1062
85 S H -0.0626
86 T H 0.0000
87 A H 0.0000
88 Y H 0.2585
89 M H 0.0000
90 E H -0.9798
91 L H 0.0000
92 S H -0.1345
93 S H -0.2867
94 L H 0.0000
95 R H -1.5281
96 S H -0.8089
97 E H -1.8579
98 D H 0.0000
99 T H -0.0206
100 A H 0.0000
101 V H 0.4197
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 S H 0.0000
107 F H 0.0000
108 L H 0.9655
109 G H -0.6016
110 R H -1.9246
113 G H 0.0000
114 A H 0.0070
115 M H 0.0000
116 D H 0.0000
117 Y H 0.3933
118 W H 0.1914
119 G H 0.0000
120 Q H -1.0449
121 G H -0.2371
122 T H 0.0000
123 T H -0.0451
124 V H 0.0000
125 T H 0.1341
126 V H 0.0000
127 S H -0.3125
128 S H -0.2316
1 D L -1.7894
2 I L 0.0000
3 Q L -1.1983
4 M L 0.0000
5 T L -0.0694
6 Q L 0.0000
7 S L -0.1573
8 P L -0.2038
9 S L -0.2702
10 S L -0.3537
11 L L 0.1665
12 S L -0.3591
13 A L -0.0395
14 S L 0.0663
15 V L 1.6612
16 G L -0.2228
17 D L -1.2457
18 R L -2.0129
19 V L 0.0000
20 T L -0.0636
21 I L 0.0000
22 T L -0.0381
23 C L 0.0000
24 R L -1.9492
25 A L 0.0000
26 S L -0.3669
27 Q L -1.1842
28 D L -1.7142
29 I L 0.0000
36 S L -0.1749
37 N L -0.2357
38 Y L 0.2855
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.1975
45 K L -0.4736
46 P L -0.4116
47 G L -0.8138
48 K L -1.7806
49 A L -0.3001
50 P L 0.0000
51 K L -0.7945
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.6381
56 Y L 0.6850
57 T L 0.0000
65 S L -0.4166
66 K L -1.1523
67 I L 0.5068
68 H L -0.0042
69 S L -0.3156
70 G L -0.4723
71 V L 0.0704
72 P L -0.1558
74 S L -0.2810
75 R L -0.2677
76 F L 0.0000
77 S L -0.1541
78 G L 0.0000
79 S L -0.2535
80 G L -0.3022
83 S L -0.2747
84 G L -0.3654
85 T L -0.3806
86 D L -1.1060
87 Y L 0.0000
88 T L -0.0217
89 F L 0.0000
90 T L -0.0209
91 I L 0.0000
92 S L -0.2960
93 S L -0.4448
94 L L 0.0000
95 Q L -0.7660
96 P L -0.6782
97 E L -1.8598
98 D L 0.0000
99 I L 1.0827
100 A L 0.0000
101 T L -0.1922
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L -0.1545
108 N L -0.5683
109 T L 0.0126
114 F L 0.7571
115 P L 0.1844
116 Y L 0.0000
117 T L -0.0117
118 F L 0.0000
119 G L 0.0000
120 Q L -0.9986
121 G L 0.0000
122 T L 0.0000
123 K L -1.2454
124 V L 0.0000
125 E L -1.6003
126 I L -0.0303
127 K L -1.5985
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Laboratory of Theory of Biopolymers 2018