| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGTVGHPLFNKLGDTENPTEPQHDSADVRVNFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPDGHPLPADPPPSLLYVPPPASSPTAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEENVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9491 | |
| 2 | L | A | 1.9723 | |
| 3 | P | A | 0.6534 | |
| 4 | P | A | 0.3500 | |
| 5 | T | A | 0.1094 | |
| 6 | T | A | 0.1293 | |
| 7 | P | A | 0.1662 | |
| 8 | V | A | 1.2175 | |
| 9 | A | A | 0.0250 | |
| 10 | K | A | -1.1609 | |
| 11 | V | A | -0.4113 | |
| 12 | Q | A | -1.5442 | |
| 13 | S | A | -1.6113 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4332 | |
| 16 | E | A | -2.4472 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4609 | |
| 20 | P | A | 0.1288 | |
| 21 | T | A | 0.1658 | |
| 22 | S | A | -0.0949 | |
| 23 | L | A | 0.1020 | |
| 24 | F | A | -0.0188 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2657 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8737 | |
| 31 | R | A | -2.6427 | |
| 32 | L | A | -0.7634 | |
| 33 | L | A | 1.1832 | |
| 34 | T | A | 1.5583 | |
| 35 | V | A | 1.8286 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2341 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6343 | |
| 40 | K | A | -1.6545 | |
| 41 | D | A | -0.9536 | |
| 42 | I | A | 0.8073 | |
| 43 | V | A | 1.0082 | |
| 44 | K | A | -1.1914 | |
| 45 | N | A | -1.9266 | |
| 46 | G | A | -1.2299 | |
| 47 | K | A | -0.9422 | |
| 48 | V | A | 1.4947 | |
| 49 | V | A | 2.0564 | |
| 50 | V | A | 1.2711 | |
| 51 | P | A | 0.4556 | |
| 52 | K | A | -0.6452 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1209 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4747 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2671 | |
| 70 | K | A | -1.8113 | |
| 71 | F | A | -0.6668 | |
| 72 | A | A | -0.5754 | |
| 73 | L | A | -0.8492 | |
| 74 | P | A | -1.2450 | |
| 75 | Q | A | -2.4771 | |
| 76 | K | A | -3.0964 | |
| 77 | D | A | -2.9949 | |
| 78 | F | A | -1.6485 | |
| 79 | Y | A | -1.9286 | |
| 80 | D | A | -2.7721 | |
| 81 | P | A | -2.3556 | |
| 82 | E | A | -3.0745 | |
| 83 | K | A | -3.4434 | |
| 84 | E | A | -2.5079 | |
| 85 | R | A | -1.3162 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6438 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9691 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3236 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6758 | |
| 99 | G | A | -0.5362 | |
| 100 | P | A | -0.5080 | |
| 101 | L | A | -0.1716 | |
| 102 | G | A | -0.7211 | |
| 103 | R | A | -1.6574 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.6592 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1002 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1947 | |
| 110 | L | A | -0.0794 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1386 | |
| 113 | K | A | -0.4451 | |
| 114 | L | A | -1.0867 | |
| 115 | G | A | -1.1923 | |
| 116 | D | A | -1.4045 | |
| 117 | T | A | -1.0945 | |
| 118 | E | A | -1.8014 | |
| 119 | N | A | -2.2857 | |
| 120 | P | A | -2.0572 | |
| 121 | T | A | -1.7282 | |
| 122 | E | A | -2.5152 | |
| 123 | P | A | -1.8577 | |
| 124 | Q | A | -1.8707 | |
| 125 | H | A | -2.0883 | |
| 126 | D | A | -2.7427 | |
| 127 | S | A | -1.8963 | |
| 128 | A | A | -1.4359 | |
| 129 | D | A | -2.1064 | |
| 130 | V | A | -1.3944 | |
| 131 | R | A | -1.0914 | |
| 132 | V | A | -0.3297 | |
| 133 | N | A | -0.9218 | |
| 134 | F | A | -0.3937 | |
| 135 | S | A | -0.3601 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.8508 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5656 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2233 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1332 | |
| 157 | D | A | 0.3116 | |
| 158 | L | A | 0.8057 | |
| 159 | A | A | 0.1707 | |
| 160 | E | A | -1.4476 | |
| 161 | P | A | -0.2183 | |
| 162 | C | A | 0.1816 | |
| 163 | P | A | -0.1684 | |
| 164 | G | A | -0.0742 | |
| 165 | L | A | 0.5865 | |
| 166 | P | A | -0.1125 | |
| 167 | P | A | -0.3396 | |
| 168 | G | A | -0.4159 | |
| 169 | A | A | -0.0144 | |
| 170 | C | A | 0.6688 | |
| 171 | P | A | 0.5283 | |
| 172 | P | A | 0.7858 | |
| 173 | I | A | 1.9917 | |
| 174 | Q | A | 0.8272 | |
| 175 | L | A | 1.4826 | |
| 176 | V | A | 0.8393 | |
| 177 | N | A | -0.3265 | |
| 178 | S | A | 0.0287 | |
| 179 | V | A | 0.4232 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3675 | |
| 182 | D | A | 0.0710 | |
| 183 | G | A | -0.1666 | |
| 184 | D | A | -0.5804 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4834 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0947 | |
| 190 | F | A | 0.0101 | |
| 191 | G | A | -0.1672 | |
| 192 | N | A | -0.3355 | |
| 193 | M | A | -0.1733 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4258 | |
| 197 | E | A | -2.6368 | |
| 198 | L | A | -1.2404 | |
| 199 | Q | A | -2.5533 | |
| 200 | Q | A | -3.3461 | |
| 201 | D | A | -3.6066 | |
| 202 | R | A | -3.3451 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2120 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3544 | |
| 211 | S | A | -1.8755 | |
| 212 | T | A | -1.4486 | |
| 213 | R | A | -2.1640 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2113 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3031 | |
| 220 | L | A | 0.5117 | |
| 221 | K | A | -1.2905 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9612 | |
| 224 | N | A | -1.5762 | |
| 225 | E | A | -1.3245 | |
| 226 | A | A | -0.6725 | |
| 227 | Y | A | -0.4521 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7039 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1360 | |
| 234 | F | A | 0.0277 | |
| 235 | G | A | -0.8681 | |
| 236 | R | A | -2.5400 | |
| 237 | R | A | -2.6652 | |
| 238 | E | A | -1.9498 | |
| 239 | Q | A | -0.0347 | |
| 240 | V | A | 1.5619 | |
| 241 | Y | A | 1.2428 | |
| 242 | A | A | 0.1465 | |
| 243 | R | A | -1.1936 | |
| 244 | H | A | -1.0278 | |
| 245 | F | A | 0.0680 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.6173 | |
| 249 | A | A | -1.3229 | |
| 250 | G | A | -1.1512 | |
| 251 | P | A | -1.2287 | |
| 252 | D | A | -1.3690 | |
| 253 | G | A | -1.3163 | |
| 254 | H | A | -1.4607 | |
| 255 | P | A | -0.8608 | |
| 256 | L | A | 0.2294 | |
| 257 | P | A | -0.0353 | |
| 258 | A | A | -0.0764 | |
| 259 | D | A | -0.7127 | |
| 260 | P | A | -0.8869 | |
| 261 | P | A | -0.1197 | |
| 262 | P | A | 0.2962 | |
| 263 | S | A | 1.0378 | |
| 264 | L | A | 2.2895 | |
| 265 | L | A | 2.6224 | |
| 266 | Y | A | 2.1078 | |
| 267 | V | A | 2.0960 | |
| 268 | P | A | 0.8945 | |
| 269 | P | A | 0.4345 | |
| 270 | P | A | -0.2169 | |
| 271 | A | A | -0.0302 | |
| 272 | S | A | -0.3621 | |
| 273 | S | A | -0.1031 | |
| 274 | P | A | -0.0423 | |
| 275 | T | A | 0.3906 | |
| 276 | A | A | 0.7752 | |
| 277 | V | A | 1.8329 | |
| 278 | L | A | 1.2261 | |
| 279 | P | A | -0.2085 | |
| 280 | P | A | -0.6296 | |
| 281 | T | A | -0.4379 | |
| 282 | D | A | -0.9326 | |
| 283 | Y | A | 0.8741 | |
| 284 | F | A | 0.7291 | |
| 285 | G | A | 0.2104 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8458 | |
| 291 | L | A | 1.4985 | |
| 292 | V | A | 0.4399 | |
| 293 | S | A | -0.1737 | |
| 294 | S | A | -0.9973 | |
| 295 | D | A | -1.8771 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0259 | |
| 298 | L | A | -1.1456 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6823 | |
| 301 | R | A | -1.9392 | |
| 302 | P | A | -0.9893 | |
| 303 | F | A | -0.1996 | |
| 304 | W | A | -0.5217 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0827 | |
| 307 | R | A | -2.9258 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6550 | |
| 310 | G | A | -1.4163 | |
| 311 | N | A | -1.3921 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9450 | |
| 319 | N | A | -1.0069 | |
| 320 | E | A | -1.0565 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.5906 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.4328 | |
| 333 | N | A | 0.4010 | |
| 334 | F | A | 1.7575 | |
| 335 | T | A | 0.8954 | |
| 336 | I | A | 0.4848 | |
| 337 | S | A | -0.9679 | |
| 338 | Q | A | -1.7688 | |
| 339 | Q | A | -1.3511 | |
| 340 | L | A | 0.6280 | |
| 341 | C | A | 0.2635 | |
| 342 | T | A | -0.4333 | |
| 343 | P | A | -1.0294 | |
| 344 | E | A | -2.3641 | |
| 345 | E | A | -2.6239 | |
| 346 | N | A | -1.5354 | |
| 347 | V | A | 0.4465 | |
| 348 | Y | A | 0.8660 | |
| 349 | D | A | -0.1397 | |
| 350 | P | A | -0.4143 | |
| 351 | S | A | -0.3461 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.8739 | |
| 354 | K | A | -1.8178 | |
| 355 | N | A | -1.7747 | |
| 356 | Y | A | -0.0552 | |
| 357 | L | A | 0.6609 | |
| 358 | R | A | 0.9713 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3703 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0251 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9320 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6637 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2780 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3200 | |
| 376 | L | A | -1.7470 | |
| 377 | D | A | -2.0195 | |
| 378 | P | A | -1.0578 | |
| 379 | G | A | -1.0220 | |
| 380 | V | A | -0.9341 | |
| 381 | L | A | -0.5450 | |
| 382 | A | A | -0.6678 | |
| 383 | H | A | -0.8557 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4219 | |
| 386 | T | A | -0.5876 | |
| 387 | M | A | -0.3401 | |
| 388 | N | A | -0.8788 | |
| 389 | P | A | -1.2890 | |
| 390 | T | A | -1.6002 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5604 | |
| 393 | E | A | -3.1627 | |
| 394 | N | A | -2.7782 | |
| 395 | W | A | -1.5572 | |
| 396 | N | A | -1.2161 | |
| 397 | L | A | -0.2180 | |
| 398 | G | A | 0.5325 | |
| 399 | F | A | 2.4193 | |
| 400 | V | A | 2.0332 | |
| 401 | P | A | 0.0572 | |
| 402 | P | A | -1.9761 | |
| 403 | K | A | -3.5262 | |
| 404 | E | A | -4.0677 | |
| 405 | R | A | -4.5671 | |
| 406 | E | A | -4.0633 | |
| 407 | D | A | -2.9749 | |
| 408 | P | A | -1.8249 | |
| 409 | Y | A | -0.9762 | |
| 410 | K | A | -2.0972 | |
| 411 | G | A | -0.6233 | |
| 412 | L | A | 0.6745 | |
| 413 | I | A | 1.5846 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3897 | |
| 416 | E | A | -1.6541 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9246 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0536 | |
| 421 | E | A | -2.7767 | |
| 422 | R | A | -2.6264 | |
| 423 | F | A | -1.2906 | |
| 424 | S | A | -1.4569 | |
| 425 | Q | A | -1.8646 | |
| 426 | D | A | -2.8857 | |
| 427 | L | A | -1.9929 | |
| 428 | D | A | -2.7754 | |
| 429 | Q | A | -2.6100 | |
| 430 | F | A | -1.4494 | |
| 431 | A | A | -0.9179 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6234 | |
| 435 | K | A | -0.7568 | |
| 436 | F | A | 0.1286 | |
| 437 | L | A | 1.0158 | |
| 438 | Y | A | 0.8126 | |
| 439 | Q | A | -0.2738 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine