| Chain sequence(s) |
A: MSHHHHHHSGFPEKPLYIYPYDAAYNLEFYLKYALVENEKDSEYYYNQLKKILPLYPLSPEELEKELKTVLERLKDPSRRYYGIKKFVELMTLALSKAYLYKKEGNYEKAKEYLEVAEKYLKEVEELIPKIEEIDPWDAKYLKSYIERLKELLEKVKENS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:08)
[INFO] Main: Simulation completed successfully. (00:07:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5646 | |
| 2 | S | A | -0.6092 | |
| 3 | H | A | -1.7426 | |
| 4 | H | A | -2.3263 | |
| 5 | H | A | -2.7399 | |
| 6 | H | A | -2.7316 | |
| 7 | H | A | -2.5530 | |
| 8 | H | A | -1.8401 | |
| 9 | S | A | -0.8510 | |
| 10 | G | A | -0.4711 | |
| 11 | F | A | 0.5553 | |
| 12 | P | A | -0.7037 | |
| 13 | E | A | -2.1688 | |
| 14 | K | A | -1.9478 | |
| 15 | P | A | -0.2390 | |
| 16 | L | A | 1.4800 | |
| 17 | Y | A | 2.2765 | |
| 18 | I | A | 1.8516 | |
| 19 | Y | A | 1.6085 | |
| 20 | P | A | 1.0944 | |
| 21 | Y | A | 1.3337 | |
| 22 | D | A | -0.2607 | |
| 23 | A | A | 0.0000 | |
| 24 | A | A | 0.0000 | |
| 25 | Y | A | 0.7017 | |
| 26 | N | A | 0.3347 | |
| 27 | L | A | 0.0000 | |
| 28 | E | A | 0.0000 | |
| 29 | F | A | 1.3266 | |
| 30 | Y | A | 0.8293 | |
| 31 | L | A | 0.0000 | |
| 32 | K | A | 0.1666 | |
| 33 | Y | A | 0.1029 | |
| 34 | A | A | 0.0000 | |
| 35 | L | A | 0.0000 | |
| 36 | V | A | -1.2699 | |
| 37 | E | A | -2.8730 | |
| 38 | N | A | -3.0035 | |
| 39 | E | A | -2.9109 | |
| 40 | K | A | -3.2095 | |
| 41 | D | A | -2.5083 | |
| 42 | S | A | -2.2003 | |
| 43 | E | A | -2.4763 | |
| 44 | Y | A | -0.9010 | |
| 45 | Y | A | -0.5431 | |
| 46 | Y | A | -1.0456 | |
| 47 | N | A | -1.4297 | |
| 48 | Q | A | -1.1686 | |
| 49 | L | A | 0.0000 | |
| 50 | K | A | -1.5528 | |
| 51 | K | A | -2.0437 | |
| 52 | I | A | 0.0000 | |
| 53 | L | A | 0.0000 | |
| 54 | P | A | -0.1726 | |
| 55 | L | A | 1.0517 | |
| 56 | Y | A | 0.8401 | |
| 57 | P | A | 0.1086 | |
| 58 | L | A | -0.5192 | |
| 59 | S | A | -1.4411 | |
| 60 | P | A | 0.0000 | |
| 61 | E | A | -3.3174 | |
| 62 | E | A | -3.1646 | |
| 63 | L | A | 0.0000 | |
| 64 | E | A | -3.5179 | |
| 65 | K | A | -3.9809 | |
| 66 | E | A | -3.1711 | |
| 67 | L | A | 0.0000 | |
| 68 | K | A | -3.5916 | |
| 69 | T | A | -2.5888 | |
| 70 | V | A | 0.0000 | |
| 71 | L | A | 0.0000 | |
| 72 | E | A | -3.5491 | |
| 73 | R | A | -2.9701 | |
| 74 | L | A | 0.0000 | |
| 75 | K | A | -3.4570 | |
| 76 | D | A | -2.7746 | |
| 77 | P | A | -1.3714 | |
| 78 | S | A | -1.2417 | |
| 79 | R | A | -1.7899 | |
| 80 | R | A | 0.0000 | |
| 81 | Y | A | -0.0538 | |
| 82 | Y | A | 0.0430 | |
| 83 | G | A | 0.0000 | |
| 84 | I | A | 0.0000 | |
| 85 | K | A | -0.8738 | |
| 86 | K | A | -1.0738 | |
| 87 | F | A | 0.0000 | |
| 88 | V | A | -0.4360 | |
| 89 | E | A | -0.7454 | |
| 90 | L | A | 0.0000 | |
| 91 | M | A | 0.0000 | |
| 92 | T | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | S | A | 0.0000 | |
| 97 | K | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | Y | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | Y | A | -1.5071 | |
| 102 | K | A | -2.0668 | |
| 103 | K | A | -2.2065 | |
| 104 | E | A | -2.5722 | |
| 105 | G | A | -2.0458 | |
| 106 | N | A | -2.0677 | |
| 107 | Y | A | -1.7848 | |
| 108 | E | A | -2.8510 | |
| 109 | K | A | -2.4270 | |
| 110 | A | A | 0.0000 | |
| 111 | K | A | -3.5332 | |
| 112 | E | A | -3.4060 | |
| 113 | Y | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | E | A | -3.0855 | |
| 116 | V | A | 0.0000 | |
| 117 | A | A | 0.0000 | |
| 118 | E | A | -2.7917 | |
| 119 | K | A | -3.4312 | |
| 120 | Y | A | 0.0000 | |
| 121 | L | A | 0.0000 | |
| 122 | K | A | -3.8633 | |
| 123 | E | A | -3.6450 | |
| 124 | V | A | 0.0000 | |
| 125 | E | A | -2.9481 | |
| 126 | E | A | -3.2830 | |
| 127 | L | A | -2.4776 | |
| 128 | I | A | 0.0000 | |
| 129 | P | A | -2.0822 | |
| 130 | K | A | -2.7383 | |
| 131 | I | A | 0.0000 | |
| 132 | E | A | -2.1721 | |
| 133 | E | A | -2.1075 | |
| 134 | I | A | 0.1685 | |
| 135 | D | A | -0.8208 | |
| 136 | P | A | -0.9634 | |
| 137 | W | A | 0.3279 | |
| 138 | D | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | K | A | -1.7150 | |
| 141 | Y | A | -0.4068 | |
| 142 | L | A | 0.0000 | |
| 143 | K | A | -1.8878 | |
| 144 | S | A | -1.4240 | |
| 145 | Y | A | -1.3754 | |
| 146 | I | A | 0.0000 | |
| 147 | E | A | -2.9640 | |
| 148 | R | A | -2.2449 | |
| 149 | L | A | 0.0000 | |
| 150 | K | A | -3.1021 | |
| 151 | E | A | -3.3753 | |
| 152 | L | A | 0.0000 | |
| 153 | L | A | 0.0000 | |
| 154 | E | A | -3.8386 | |
| 155 | K | A | -3.2572 | |
| 156 | V | A | 0.0000 | |
| 157 | K | A | -3.2792 | |
| 158 | E | A | -3.3525 | |
| 159 | N | A | -2.4497 | |
| 160 | S | A | -1.4570 |