| Chain sequence(s) |
L: KGDLPWLDPPPD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 398 | K | L | -1.7835 | |
| 399 | G | L | -1.1023 | |
| 400 | D | L | -1.5902 | |
| 401 | L | L | 1.1713 | |
| 402 | P | L | 0.2046 | |
| 403 | W | L | 1.2151 | |
| 404 | L | L | 1.3961 | |
| 405 | D | L | -1.5511 | |
| 406 | P | L | -0.5936 | |
| 407 | P | L | -0.2056 | |
| 408 | P | L | -0.6029 | |
| 409 | D | L | -1.8361 |