| Chain sequence(s) |
A: MIKSCATIALAPEIETGPWIYWERPDISIPKAAKLGFDAVELFTGSADAVAPEQLEQLCAANKIDIAAVGTGAGKVLKGWTLTSPDKHVRQKAVAFISEMIAFGARFGAPAIIGSMQGNVEPGTERPQAVAWLTEGLNELGARAQEQGVNLIYEPLNRYETNMFNQLSAGAEFLKTLDTQNVLLLADLFHMNIEEESLAGAIRANASQIGHLHFADSNRRPVGMGHTDMMDIARVLMEVGYAGYASAEVFPWPDPDAAAEQTMRAFKECFSVV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:47)
[INFO] Main: Simulation completed successfully. (00:05:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.6134 | |
| 2 | I | A | 0.0000 | |
| 3 | K | A | -0.1694 | |
| 4 | S | A | 0.0000 | |
| 5 | C | A | 0.0000 | |
| 6 | A | A | 0.0000 | |
| 7 | T | A | 0.0000 | |
| 8 | I | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | L | A | -0.8003 | |
| 11 | A | A | 0.0000 | |
| 12 | P | A | -1.5930 | |
| 13 | E | A | -2.0549 | |
| 14 | I | A | -1.3248 | |
| 15 | E | A | -2.2900 | |
| 16 | T | A | -1.0699 | |
| 17 | G | A | -0.6079 | |
| 18 | P | A | 0.0023 | |
| 19 | W | A | 0.0000 | |
| 20 | I | A | 0.0000 | |
| 21 | Y | A | 0.0000 | |
| 22 | W | A | -0.7712 | |
| 23 | E | A | -1.2267 | |
| 24 | R | A | -1.9597 | |
| 25 | P | A | 0.0000 | |
| 26 | D | A | -1.3530 | |
| 27 | I | A | -0.3058 | |
| 28 | S | A | 0.0000 | |
| 29 | I | A | 0.0000 | |
| 30 | P | A | -0.9428 | |
| 31 | K | A | -1.1324 | |
| 32 | A | A | 0.0000 | |
| 33 | A | A | -1.7140 | |
| 34 | K | A | -1.9135 | |
| 35 | L | A | -1.5353 | |
| 36 | G | A | -1.3873 | |
| 37 | F | A | 0.0000 | |
| 38 | D | A | -1.5459 | |
| 39 | A | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | E | A | 0.0000 | |
| 42 | L | A | 0.0000 | |
| 43 | F | A | 0.0000 | |
| 44 | T | A | 0.0000 | |
| 45 | G | A | -0.5653 | |
| 46 | S | A | -0.8999 | |
| 47 | A | A | -1.3339 | |
| 48 | D | A | -1.9699 | |
| 49 | A | A | -0.7287 | |
| 50 | V | A | -1.0285 | |
| 51 | A | A | -1.4689 | |
| 52 | P | A | -2.3897 | |
| 53 | E | A | -3.3599 | |
| 54 | Q | A | -2.8336 | |
| 55 | L | A | 0.0000 | |
| 56 | E | A | -3.5680 | |
| 57 | Q | A | -3.0509 | |
| 58 | L | A | -1.9315 | |
| 59 | C | A | -2.0076 | |
| 60 | A | A | -1.6058 | |
| 61 | A | A | -1.0608 | |
| 62 | N | A | -1.8484 | |
| 63 | K | A | -2.2267 | |
| 64 | I | A | 0.0000 | |
| 65 | D | A | -1.5943 | |
| 66 | I | A | 0.0000 | |
| 67 | A | A | 0.0000 | |
| 68 | A | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | G | A | 0.0000 | |
| 71 | T | A | 0.0000 | |
| 72 | G | A | -0.1638 | |
| 73 | A | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | K | A | -0.8369 | |
| 76 | V | A | 0.4264 | |
| 77 | L | A | -0.3218 | |
| 78 | K | A | -1.6099 | |
| 79 | G | A | -1.1135 | |
| 80 | W | A | -1.1593 | |
| 81 | T | A | -0.8538 | |
| 82 | L | A | 0.0000 | |
| 83 | T | A | 0.0000 | |
| 84 | S | A | -1.4033 | |
| 85 | P | A | -1.6651 | |
| 86 | D | A | -2.4539 | |
| 87 | K | A | -3.1869 | |
| 88 | H | A | -2.7095 | |
| 89 | V | A | -2.1403 | |
| 90 | R | A | -2.0917 | |
| 91 | Q | A | -2.4897 | |
| 92 | K | A | -2.0670 | |
| 93 | A | A | 0.0000 | |
| 94 | V | A | -1.1169 | |
| 95 | A | A | -0.9028 | |
| 96 | F | A | -0.7944 | |
| 97 | I | A | 0.0000 | |
| 98 | S | A | -1.1498 | |
| 99 | E | A | -2.0334 | |
| 100 | M | A | 0.0000 | |
| 101 | I | A | 0.0000 | |
| 102 | A | A | -1.5690 | |
| 103 | F | A | 0.0000 | |
| 104 | G | A | 0.0000 | |
| 105 | A | A | -1.8095 | |
| 106 | R | A | -2.4408 | |
| 107 | F | A | -1.3328 | |
| 108 | G | A | -1.1978 | |
| 109 | A | A | 0.0000 | |
| 110 | P | A | -0.5049 | |
| 111 | A | A | 0.0000 | |
| 112 | I | A | 0.0000 | |
| 113 | I | A | 0.0000 | |
| 114 | G | A | -0.4315 | |
| 115 | S | A | -0.5958 | |
| 116 | M | A | 0.0000 | |
| 117 | Q | A | 0.0000 | |
| 118 | G | A | 0.0000 | |
| 119 | N | A | -1.4103 | |
| 120 | V | A | -1.6714 | |
| 121 | E | A | -2.0214 | |
| 122 | P | A | -1.4532 | |
| 123 | G | A | -1.4228 | |
| 124 | T | A | -1.9895 | |
| 125 | E | A | -2.7654 | |
| 126 | R | A | -2.3800 | |
| 127 | P | A | -1.3315 | |
| 128 | Q | A | -1.3027 | |
| 129 | A | A | 0.0000 | |
| 130 | V | A | -0.6146 | |
| 131 | A | A | -0.6067 | |
| 132 | W | A | -0.9079 | |
| 133 | L | A | 0.0000 | |
| 134 | T | A | -1.2676 | |
| 135 | E | A | -2.2392 | |
| 136 | G | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | N | A | -2.0631 | |
| 139 | E | A | -1.9001 | |
| 140 | L | A | 0.0000 | |
| 141 | G | A | 0.0000 | |
| 142 | A | A | -2.1760 | |
| 143 | R | A | -2.3875 | |
| 144 | A | A | 0.0000 | |
| 145 | Q | A | -2.8904 | |
| 146 | E | A | -3.0877 | |
| 147 | Q | A | -2.6493 | |
| 148 | G | A | -2.1804 | |
| 149 | V | A | -1.5683 | |
| 150 | N | A | -1.3788 | |
| 151 | L | A | 0.0000 | |
| 152 | I | A | 0.0000 | |
| 153 | Y | A | 0.0000 | |
| 154 | E | A | 0.0000 | |
| 155 | P | A | 0.0000 | |
| 156 | L | A | 0.0000 | |
| 157 | N | A | 0.0000 | |
| 158 | R | A | -2.0598 | |
| 159 | Y | A | -0.5960 | |
| 160 | E | A | -2.0425 | |
| 161 | T | A | 0.0000 | |
| 162 | N | A | -1.9151 | |
| 163 | M | A | 0.0000 | |
| 164 | F | A | -0.8009 | |
| 165 | N | A | -1.2027 | |
| 166 | Q | A | -1.0738 | |
| 167 | L | A | 0.0000 | |
| 168 | S | A | -0.8919 | |
| 169 | A | A | -0.8670 | |
| 170 | G | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | E | A | -2.4379 | |
| 173 | F | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | K | A | -2.8008 | |
| 176 | T | A | -1.8560 | |
| 177 | L | A | 0.0000 | |
| 178 | D | A | -2.7805 | |
| 179 | T | A | -2.1939 | |
| 180 | Q | A | -2.1773 | |
| 181 | N | A | -1.6956 | |
| 182 | V | A | 0.0000 | |
| 183 | L | A | -0.3682 | |
| 184 | L | A | 0.0000 | |
| 185 | L | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | L | A | 0.0000 | |
| 189 | F | A | 0.0220 | |
| 190 | H | A | 0.0000 | |
| 191 | M | A | 0.0000 | |
| 192 | N | A | -0.5397 | |
| 193 | I | A | -0.1651 | |
| 194 | E | A | -0.9755 | |
| 195 | E | A | -1.3120 | |
| 196 | E | A | -2.0218 | |
| 197 | S | A | -1.3133 | |
| 198 | L | A | -0.9831 | |
| 199 | A | A | 0.0000 | |
| 200 | G | A | -1.2672 | |
| 201 | A | A | -1.1579 | |
| 202 | I | A | 0.0000 | |
| 203 | R | A | -2.0812 | |
| 204 | A | A | -1.0133 | |
| 205 | N | A | -1.0591 | |
| 206 | A | A | -1.0225 | |
| 207 | S | A | -0.5911 | |
| 208 | Q | A | -0.5556 | |
| 209 | I | A | 0.0000 | |
| 210 | G | A | -0.1867 | |
| 211 | H | A | 0.0000 | |
| 212 | L | A | 0.0000 | |
| 213 | H | A | 0.0000 | |
| 214 | F | A | 0.0000 | |
| 215 | A | A | 0.0000 | |
| 216 | D | A | 0.0000 | |
| 217 | S | A | -1.0249 | |
| 218 | N | A | -0.9048 | |
| 219 | R | A | -0.4651 | |
| 220 | R | A | -0.5437 | |
| 221 | P | A | 0.0000 | |
| 222 | V | A | 0.0000 | |
| 223 | G | A | -1.1657 | |
| 224 | M | A | -0.5973 | |
| 225 | G | A | -1.3544 | |
| 226 | H | A | -1.7467 | |
| 227 | T | A | -1.5013 | |
| 228 | D | A | -1.9700 | |
| 229 | M | A | 0.0000 | |
| 230 | M | A | -0.4666 | |
| 231 | D | A | -0.9376 | |
| 232 | I | A | 0.0000 | |
| 233 | A | A | 0.0000 | |
| 234 | R | A | -1.0358 | |
| 235 | V | A | 0.0000 | |
| 236 | L | A | 0.0000 | |
| 237 | M | A | -0.2128 | |
| 238 | E | A | -1.9575 | |
| 239 | V | A | -1.0629 | |
| 240 | G | A | -0.4206 | |
| 241 | Y | A | 0.0000 | |
| 242 | A | A | 0.5457 | |
| 243 | G | A | 0.0360 | |
| 244 | Y | A | -0.0359 | |
| 245 | A | A | 0.0000 | |
| 246 | S | A | 0.0000 | |
| 247 | A | A | 0.0000 | |
| 248 | E | A | 0.0000 | |
| 249 | V | A | 0.0000 | |
| 250 | F | A | 0.4231 | |
| 251 | P | A | -0.1679 | |
| 252 | W | A | -0.0553 | |
| 253 | P | A | -0.5410 | |
| 254 | D | A | -1.2200 | |
| 255 | P | A | -1.0716 | |
| 256 | D | A | -1.6412 | |
| 257 | A | A | -1.2367 | |
| 258 | A | A | 0.0000 | |
| 259 | A | A | 0.0000 | |
| 260 | E | A | -1.9743 | |
| 261 | Q | A | -1.5045 | |
| 262 | T | A | 0.0000 | |
| 263 | M | A | 0.0000 | |
| 264 | R | A | -2.9621 | |
| 265 | A | A | 0.0000 | |
| 266 | F | A | 0.0000 | |
| 267 | K | A | -2.4999 | |
| 268 | E | A | -2.6150 | |
| 269 | C | A | 0.0000 | |
| 270 | F | A | 0.0000 | |
| 271 | S | A | 0.3380 | |
| 272 | V | A | 2.0899 | |
| 273 | V | A | 2.3214 |