Project name: 183

Status: done

Started: 2025-06-25 13:26:00
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Chain sequence(s) H: QVQLQESGGDSVEAGGSLRLSCAASGSTYSSNCMGWFRQAPGKEREEVASMSIRSGNAYYSDSVKGRFTISHDGSKNTLYLQMNSLKAEDTAMYYCAAAYGGSRCDYNYRGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:45)
Show buried residues

Minimal score value
-2.9953
Maximal score value
1.1398
Average score
-0.9499
Total score value
-113.9899

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.8146
2 V H 0.0000
3 Q H -2.2161
4 L H 0.0000
5 Q H -2.0015
6 E H 0.0000
7 S H -1.1287
8 G H -1.3787
9 G H -1.6389
11 D H -2.3147
12 S H -1.5131
13 V H -1.4920
14 E H -2.1733
15 A H -1.7832
16 G H -1.4190
17 G H 0.0000
18 S H -1.1036
19 L H -1.2212
20 R H -1.5521
21 L H 0.0000
22 S H -0.6318
23 C H 0.0000
24 A H -1.1559
25 A H 0.0000
26 S H -1.3639
27 G H -1.0746
28 S H -0.5572
29 T H -0.0614
30 Y H 1.1398
35 S H 0.4026
36 S H -0.1265
37 N H 0.0000
38 C H 0.0000
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H -0.4777
43 R H 0.0000
44 Q H -1.6029
45 A H -1.4909
46 P H -1.1117
47 G H -1.5592
48 K H -2.4588
49 E H -2.9953
50 R H -2.3455
51 E H -1.7810
52 E H -0.9057
53 V H 0.0000
54 A H 0.0000
55 S H 0.0000
56 M H 0.0000
57 S H -0.7161
58 I H -0.9877
59 R H -2.0626
62 S H -1.4446
63 G H -1.3586
64 N H -1.0400
65 A H 0.2031
66 Y H 0.7497
67 Y H -0.2907
68 S H -1.2230
69 D H -2.3986
70 S H -1.7932
71 V H 0.0000
72 K H -2.3941
74 G H -1.7176
75 R H -1.4779
76 F H 0.0000
77 T H -0.5488
78 I H 0.0000
79 S H -0.3714
80 H H -0.8062
81 D H -1.3516
82 G H -1.6792
83 S H -1.5272
84 K H -2.3351
85 N H -1.5442
86 T H -1.2480
87 L H 0.0000
88 Y H -0.2811
89 L H 0.0000
90 Q H -0.8487
91 M H 0.0000
92 N H -1.1643
93 S H -1.2096
94 L H 0.0000
95 K H -2.0502
96 A H -1.5170
97 E H -1.8255
98 D H 0.0000
99 T H -1.0430
100 A H 0.0000
101 M H -0.2878
102 Y H 0.0000
103 Y H -0.9249
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 A H 0.0000
108 Y H -0.2073
109 G H -1.2929
110 G H -1.2086
111 S H -1.5468
112 R H -2.5627
113 C H -1.8423
114 D H -2.6023
115 Y H -1.8249
116 N H -2.0414
117 Y H -2.0972
118 R H -2.5914
119 G H 0.0000
120 Q H -1.8250
121 G H -1.1849
122 T H -1.0738
123 Q H -1.1716
124 V H 0.0000
125 T H -1.2684
126 V H 0.0000
127 S H -1.2750
128 S H -0.9494
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Laboratory of Theory of Biopolymers 2018