| Chain sequence(s) |
A: GYCAEKGIRCDDIHCCTGLKCKCNASGYNCVCRKK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.2372 | |
| 2 | Y | A | 0.8786 | |
| 3 | C | A | -0.1730 | |
| 4 | A | A | 0.0000 | |
| 5 | E | A | -2.9643 | |
| 6 | K | A | -3.3811 | |
| 7 | G | A | -2.1821 | |
| 8 | I | A | -1.1790 | |
| 9 | R | A | -2.5934 | |
| 10 | C | A | 0.0000 | |
| 11 | D | A | -2.9989 | |
| 12 | D | A | -3.0296 | |
| 13 | I | A | -1.4248 | |
| 14 | H | A | -1.8277 | |
| 15 | C | A | -2.2297 | |
| 16 | C | A | -1.2991 | |
| 17 | T | A | -0.9720 | |
| 18 | G | A | -2.1525 | |
| 19 | L | A | 0.0000 | |
| 20 | K | A | -3.6678 | |
| 21 | C | A | -2.4006 | |
| 22 | K | A | -2.3439 | |
| 23 | C | A | -1.1382 | |
| 24 | N | A | -1.1748 | |
| 25 | A | A | -0.6616 | |
| 26 | S | A | -0.4912 | |
| 27 | G | A | -0.5711 | |
| 28 | Y | A | 0.0048 | |
| 29 | N | A | -1.2491 | |
| 30 | C | A | -1.1275 | |
| 31 | V | A | -1.3634 | |
| 32 | C | A | 0.0000 | |
| 33 | R | A | -3.9334 | |
| 34 | K | A | -4.3903 | |
| 35 | K | A | -3.6188 |