| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSCTASDRAFSTYNMGWFRQAPGKEREFVAGINWTGRSADYPDSVKGRFTISRDNAKNAVYLQMNSLKPEDTAVYYCAAKRYGSRSDYSWNDYDSWGQGTQVTVSSGAAEPEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:40)
[INFO] Main: Simulation completed successfully. (00:01:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.7521 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.9330 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.4700 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.0977 | |
| 8 | G | A | -0.9768 | |
| 9 | G | A | -0.7698 | |
| 10 | G | A | -0.0471 | |
| 11 | L | A | 1.1204 | |
| 12 | V | A | 0.1650 | |
| 13 | Q | A | -0.9711 | |
| 14 | A | A | -1.3083 | |
| 15 | G | A | -1.2239 | |
| 16 | G | A | -0.8052 | |
| 17 | S | A | -1.1918 | |
| 18 | L | A | -1.0203 | |
| 19 | R | A | -2.1237 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.7958 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -1.1213 | |
| 24 | A | A | -1.5208 | |
| 25 | S | A | -1.5341 | |
| 26 | D | A | -1.8212 | |
| 27 | R | A | -2.3682 | |
| 28 | A | A | -1.2524 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.7980 | |
| 31 | T | A | -0.3471 | |
| 32 | Y | A | 0.0000 | |
| 33 | N | A | -0.3415 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | -1.5971 | |
| 39 | Q | A | -2.1255 | |
| 40 | A | A | -2.0410 | |
| 41 | P | A | -1.3456 | |
| 42 | G | A | -1.9049 | |
| 43 | K | A | -3.4220 | |
| 44 | E | A | -3.6819 | |
| 45 | R | A | -2.9819 | |
| 46 | E | A | -3.0568 | |
| 47 | F | A | -1.3773 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -0.6872 | |
| 53 | W | A | -0.2677 | |
| 54 | T | A | -0.7549 | |
| 55 | G | A | -1.3663 | |
| 56 | R | A | -2.0230 | |
| 57 | S | A | -1.3235 | |
| 58 | A | A | -0.8901 | |
| 59 | D | A | -1.1002 | |
| 60 | Y | A | -1.2357 | |
| 61 | P | A | -1.7276 | |
| 62 | D | A | -2.6443 | |
| 63 | S | A | -1.6357 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.7759 | |
| 66 | G | A | -1.8158 | |
| 67 | R | A | -1.6748 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9516 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.6510 | |
| 72 | R | A | -1.2213 | |
| 73 | D | A | -1.7056 | |
| 74 | N | A | -1.9155 | |
| 75 | A | A | -1.6381 | |
| 76 | K | A | -2.4575 | |
| 77 | N | A | -2.0266 | |
| 78 | A | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6212 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.2329 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.4087 | |
| 85 | S | A | -1.1535 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.0767 | |
| 88 | P | A | -1.7552 | |
| 89 | E | A | -2.2377 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8436 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4014 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.5641 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | K | A | 0.0000 | |
| 100 | R | A | -1.5778 | |
| 101 | Y | A | -0.3082 | |
| 102 | G | A | -1.0563 | |
| 103 | S | A | -1.8114 | |
| 104 | R | A | -2.4238 | |
| 105 | S | A | -1.8835 | |
| 106 | D | A | -2.0024 | |
| 107 | Y | A | -0.1826 | |
| 108 | S | A | -0.8862 | |
| 109 | W | A | -1.0170 | |
| 110 | N | A | -2.3597 | |
| 111 | D | A | -3.0560 | |
| 112 | Y | A | 0.0000 | |
| 113 | D | A | -2.5561 | |
| 114 | S | A | 0.0000 | |
| 115 | W | A | -0.6467 | |
| 116 | G | A | -0.8851 | |
| 117 | Q | A | -1.4882 | |
| 118 | G | A | 0.0000 | |
| 119 | T | A | -1.0019 | |
| 120 | Q | A | -1.0952 | |
| 121 | V | A | 0.0000 | |
| 122 | T | A | -0.1740 | |
| 123 | V | A | 0.0000 | |
| 124 | S | A | -0.6997 | |
| 125 | S | A | -1.0306 | |
| 126 | G | A | -0.9521 | |
| 127 | A | A | -0.9557 | |
| 128 | A | A | -1.4705 | |
| 129 | E | A | -2.4679 | |
| 130 | P | A | -1.9640 | |
| 131 | E | A | -2.4341 | |
| 132 | A | A | -1.1883 |