Project name: query_structure

Status: done

Started: 2026-03-16 23:13:56
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Chain sequence(s) A: EVQLVESGGGLVQAGDSLRLSCTASWFRQAPGKEREFVARFSISADSAKNTVYLQMNSLKPEDTAVYYCAAGQGTQVTVSSGRTFSRAVMGAISAAPGTAYYAFYADSVRGDLKMQVAAYMNQRSVDYW
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:05)
Show buried residues

Minimal score value
-4.1131
Maximal score value
1.6798
Average score
-0.6808
Total score value
-87.8279

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.2640
2 V A 0.4116
3 Q A -0.2587
4 L A 0.4136
5 V A 1.4641
6 E A 0.2554
7 S A -0.2416
8 G A -0.8441
9 G A -0.9248
10 G A -0.2268
11 L A 0.3609
12 V A -0.6023
13 Q A -1.4504
14 A A -2.2330
15 G A -2.0166
16 D A -2.3060
17 S A -2.1999
18 L A -1.8719
19 R A -2.4401
20 L A 0.0000
21 S A -0.2055
22 C A 0.0000
23 T A 0.0725
24 A A -0.1386
25 S A 0.3140
26 W A 0.0000
27 F A -0.2725
28 R A -1.4593
29 Q A -2.5027
30 A A -2.4525
31 P A -1.7277
32 G A -2.0597
33 K A -3.7537
34 E A -4.1131
35 R A -3.7095
36 E A -2.6513
37 F A 0.0363
38 V A 0.3540
39 A A 0.2877
40 R A -0.2462
41 F A 1.3815
42 S A 1.0447
43 I A 1.2010
44 S A 0.1513
45 A A -0.8622
46 D A -2.0779
47 S A -1.7010
48 A A -1.4907
49 K A -2.3892
50 N A -1.8165
51 T A -0.6715
52 V A 0.2206
53 Y A 0.1299
54 L A 0.0000
55 Q A -1.7788
56 M A -2.0369
57 N A -2.5198
58 S A -2.0037
59 L A 0.0000
60 K A -3.1665
61 P A -2.1584
62 E A -2.7517
63 D A -2.0585
64 T A -1.2905
65 A A 0.0000
66 V A -0.5009
67 Y A 0.0000
68 Y A -0.2078
69 C A 0.0000
70 A A 0.1999
71 A A -0.0359
72 G A -0.9209
73 Q A -0.6060
74 G A -0.2879
75 T A -0.2194
76 Q A -0.3819
77 V A 0.0000
78 T A 0.0000
79 V A 0.0000
80 S A -1.1800
81 S A -1.5468
82 G A -1.3467
83 R A -1.9581
84 T A -0.9092
85 F A -0.3412
86 S A -0.8514
87 R A -1.4829
88 A A 0.0551
89 V A 1.0775
90 M A 1.5705
91 G A 1.2450
92 A A 1.1289
93 I A 1.5364
94 S A 0.4492
95 A A 0.2390
96 A A -0.0544
97 P A -0.4733
98 G A -0.9369
99 T A -0.3783
100 A A 0.4157
101 Y A 1.1923
102 Y A 1.6798
103 A A 0.0000
104 F A 0.8509
105 Y A 0.0725
106 A A -0.6849
107 D A -2.1032
108 S A -1.6814
109 V A -0.2084
110 R A -1.8245
111 G A -1.9054
112 D A -2.1726
113 L A -0.8516
114 K A -1.7993
115 M A -1.0935
116 Q A -1.3296
117 V A 0.0000
118 A A 0.4635
119 A A 0.8701
120 Y A 1.2952
121 M A 0.5949
122 N A -0.7780
123 Q A -1.8973
124 R A -2.6392
125 S A -1.5438
126 V A -0.4105
127 D A -0.9076
128 Y A 1.1125
129 W A 1.4211
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Laboratory of Theory of Biopolymers 2018