| Chain sequence(s) |
A: EVQLVESGGGLVQAGDSLRLSCTASWFRQAPGKEREFVARFSISADSAKNTVYLQMNSLKPEDTAVYYCAAGQGTQVTVSSGRTFSRAVMGAISAAPGTAYYAFYADSVRGDLKMQVAAYMNQRSVDYW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:04)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.2640 | |
| 2 | V | A | 0.4116 | |
| 3 | Q | A | -0.2587 | |
| 4 | L | A | 0.4136 | |
| 5 | V | A | 1.4641 | |
| 6 | E | A | 0.2554 | |
| 7 | S | A | -0.2416 | |
| 8 | G | A | -0.8441 | |
| 9 | G | A | -0.9248 | |
| 10 | G | A | -0.2268 | |
| 11 | L | A | 0.3609 | |
| 12 | V | A | -0.6023 | |
| 13 | Q | A | -1.4504 | |
| 14 | A | A | -2.2330 | |
| 15 | G | A | -2.0166 | |
| 16 | D | A | -2.3060 | |
| 17 | S | A | -2.1999 | |
| 18 | L | A | -1.8719 | |
| 19 | R | A | -2.4401 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2055 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | 0.0725 | |
| 24 | A | A | -0.1386 | |
| 25 | S | A | 0.3140 | |
| 26 | W | A | 0.0000 | |
| 27 | F | A | -0.2725 | |
| 28 | R | A | -1.4593 | |
| 29 | Q | A | -2.5027 | |
| 30 | A | A | -2.4525 | |
| 31 | P | A | -1.7277 | |
| 32 | G | A | -2.0597 | |
| 33 | K | A | -3.7537 | |
| 34 | E | A | -4.1131 | |
| 35 | R | A | -3.7095 | |
| 36 | E | A | -2.6513 | |
| 37 | F | A | 0.0363 | |
| 38 | V | A | 0.3540 | |
| 39 | A | A | 0.2877 | |
| 40 | R | A | -0.2462 | |
| 41 | F | A | 1.3815 | |
| 42 | S | A | 1.0447 | |
| 43 | I | A | 1.2010 | |
| 44 | S | A | 0.1513 | |
| 45 | A | A | -0.8622 | |
| 46 | D | A | -2.0779 | |
| 47 | S | A | -1.7010 | |
| 48 | A | A | -1.4907 | |
| 49 | K | A | -2.3892 | |
| 50 | N | A | -1.8165 | |
| 51 | T | A | -0.6715 | |
| 52 | V | A | 0.2206 | |
| 53 | Y | A | 0.1299 | |
| 54 | L | A | 0.0000 | |
| 55 | Q | A | -1.7788 | |
| 56 | M | A | -2.0369 | |
| 57 | N | A | -2.5198 | |
| 58 | S | A | -2.0037 | |
| 59 | L | A | 0.0000 | |
| 60 | K | A | -3.1665 | |
| 61 | P | A | -2.1584 | |
| 62 | E | A | -2.7517 | |
| 63 | D | A | -2.0585 | |
| 64 | T | A | -1.2905 | |
| 65 | A | A | 0.0000 | |
| 66 | V | A | -0.5009 | |
| 67 | Y | A | 0.0000 | |
| 68 | Y | A | -0.2078 | |
| 69 | C | A | 0.0000 | |
| 70 | A | A | 0.1999 | |
| 71 | A | A | -0.0359 | |
| 72 | G | A | -0.9209 | |
| 73 | Q | A | -0.6060 | |
| 74 | G | A | -0.2879 | |
| 75 | T | A | -0.2194 | |
| 76 | Q | A | -0.3819 | |
| 77 | V | A | 0.0000 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | S | A | -1.1800 | |
| 81 | S | A | -1.5468 | |
| 82 | G | A | -1.3467 | |
| 83 | R | A | -1.9581 | |
| 84 | T | A | -0.9092 | |
| 85 | F | A | -0.3412 | |
| 86 | S | A | -0.8514 | |
| 87 | R | A | -1.4829 | |
| 88 | A | A | 0.0551 | |
| 89 | V | A | 1.0775 | |
| 90 | M | A | 1.5705 | |
| 91 | G | A | 1.2450 | |
| 92 | A | A | 1.1289 | |
| 93 | I | A | 1.5364 | |
| 94 | S | A | 0.4492 | |
| 95 | A | A | 0.2390 | |
| 96 | A | A | -0.0544 | |
| 97 | P | A | -0.4733 | |
| 98 | G | A | -0.9369 | |
| 99 | T | A | -0.3783 | |
| 100 | A | A | 0.4157 | |
| 101 | Y | A | 1.1923 | |
| 102 | Y | A | 1.6798 | |
| 103 | A | A | 0.0000 | |
| 104 | F | A | 0.8509 | |
| 105 | Y | A | 0.0725 | |
| 106 | A | A | -0.6849 | |
| 107 | D | A | -2.1032 | |
| 108 | S | A | -1.6814 | |
| 109 | V | A | -0.2084 | |
| 110 | R | A | -1.8245 | |
| 111 | G | A | -1.9054 | |
| 112 | D | A | -2.1726 | |
| 113 | L | A | -0.8516 | |
| 114 | K | A | -1.7993 | |
| 115 | M | A | -1.0935 | |
| 116 | Q | A | -1.3296 | |
| 117 | V | A | 0.0000 | |
| 118 | A | A | 0.4635 | |
| 119 | A | A | 0.8701 | |
| 120 | Y | A | 1.2952 | |
| 121 | M | A | 0.5949 | |
| 122 | N | A | -0.7780 | |
| 123 | Q | A | -1.8973 | |
| 124 | R | A | -2.6392 | |
| 125 | S | A | -1.5438 | |
| 126 | V | A | -0.4105 | |
| 127 | D | A | -0.9076 | |
| 128 | Y | A | 1.1125 | |
| 129 | W | A | 1.4211 |