| Chain sequence(s) |
A: MSHHHHHHSGMPSREEVEARVREHLQHGGTMEEWEELEVQLAEVLGEEKYRSMTSREWNEYIRRLAEPPNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5418 | |
| 2 | S | A | -0.6278 | |
| 3 | H | A | -1.7413 | |
| 4 | H | A | -2.3593 | |
| 5 | H | A | -2.7496 | |
| 6 | H | A | -2.8123 | |
| 7 | H | A | -2.5125 | |
| 8 | H | A | -2.0099 | |
| 9 | S | A | -1.0669 | |
| 10 | G | A | -0.4040 | |
| 11 | M | A | 0.1118 | |
| 12 | P | A | -0.9588 | |
| 13 | S | A | -1.3156 | |
| 14 | R | A | -2.4370 | |
| 15 | E | A | -3.0903 | |
| 16 | E | A | -2.7190 | |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -2.4412 | |
| 19 | A | A | -2.4608 | |
| 20 | R | A | -2.9402 | |
| 21 | V | A | 0.0000 | |
| 22 | R | A | -3.2359 | |
| 23 | E | A | -3.2840 | |
| 24 | H | A | -2.2660 | |
| 25 | L | A | -1.9569 | |
| 26 | Q | A | -2.8414 | |
| 27 | H | A | -2.2995 | |
| 28 | G | A | -1.4465 | |
| 29 | G | A | -1.3656 | |
| 30 | T | A | -1.0094 | |
| 31 | M | A | -1.0424 | |
| 32 | E | A | -2.9456 | |
| 33 | E | A | -3.0563 | |
| 34 | W | A | -2.1864 | |
| 35 | E | A | -3.0697 | |
| 36 | E | A | -2.9461 | |
| 37 | L | A | -1.9818 | |
| 38 | E | A | -1.2154 | |
| 39 | V | A | -0.0587 | |
| 40 | Q | A | -1.0595 | |
| 41 | L | A | 0.0000 | |
| 42 | A | A | -1.3449 | |
| 43 | E | A | -2.1061 | |
| 44 | V | A | -1.4457 | |
| 45 | L | A | 0.0000 | |
| 46 | G | A | -2.6619 | |
| 47 | E | A | -3.8369 | |
| 48 | E | A | -3.8971 | |
| 49 | K | A | -3.0906 | |
| 50 | Y | A | -2.3311 | |
| 51 | R | A | -3.0760 | |
| 52 | S | A | -2.1354 | |
| 53 | M | A | -1.6467 | |
| 54 | T | A | -1.6528 | |
| 55 | S | A | -2.0695 | |
| 56 | R | A | -3.1633 | |
| 57 | E | A | -3.0444 | |
| 58 | W | A | 0.0000 | |
| 59 | N | A | -3.2793 | |
| 60 | E | A | -3.3115 | |
| 61 | Y | A | -2.3343 | |
| 62 | I | A | -2.4904 | |
| 63 | R | A | -3.5487 | |
| 64 | R | A | -3.6270 | |
| 65 | L | A | 0.0000 | |
| 66 | A | A | -2.9507 | |
| 67 | E | A | -3.3492 | |
| 68 | P | A | -2.3041 | |
| 69 | P | A | -1.8153 | |
| 70 | N | A | -1.8447 | |
| 71 | S | A | -0.9499 |