Project name: query_structure

Status: done

Started: 2026-03-17 01:09:44
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYVITYGETGHGWFPGQTFEVPGSKSTATISGLKPGVDYTITVYAFYPRSSRPSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-3.6249
Maximal score value
1.6472
Average score
-0.7109
Total score value
-65.4059

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6472
2 S A 0.2715
3 D A -0.2955
4 V A -0.5322
5 P A 0.0000
6 R A -3.6249
7 D A -3.6086
8 L A 0.0000
9 E A -2.2184
10 V A 0.0620
11 V A 1.5248
12 A A 0.8878
13 A A 0.3065
14 T A -0.3385
15 P A -1.1252
16 T A -1.0028
17 S A -0.5297
18 L A 0.0000
19 L A 0.7147
20 I A 0.0000
21 S A -1.2122
22 W A 0.0000
23 D A -3.4124
24 A A -1.7619
25 P A -0.5624
26 A A 0.3600
27 V A 0.5043
28 T A -0.1821
29 V A -0.6615
30 D A -1.6389
31 F A -0.9786
32 Y A 0.0000
33 V A -0.0898
34 I A 0.0000
35 T A -0.5233
36 Y A 0.0000
37 G A -0.8297
38 E A -1.6815
39 T A -1.3180
40 G A -1.0901
41 H A -1.1113
42 G A -0.2272
43 W A 1.1777
44 F A 1.0874
45 P A 0.2241
46 G A -0.3671
47 Q A -1.1790
48 T A -0.8127
49 F A -0.6201
50 E A -1.4256
51 V A 0.0000
52 P A -1.3590
53 G A -1.3381
54 S A -1.3430
55 K A -2.0335
56 S A -1.4208
57 T A -0.7880
58 A A 0.0000
59 T A 0.2795
60 I A 0.0000
61 S A -0.7763
62 G A -1.1509
63 L A 0.0000
64 K A -2.3853
65 P A -1.6519
66 G A -1.4347
67 V A -1.4375
68 D A -2.1799
69 Y A 0.0000
70 T A -1.1874
71 I A 0.0000
72 T A -0.0526
73 V A 0.0000
74 Y A 0.2237
75 A A 0.0000
76 F A -0.4699
77 Y A 0.0000
78 P A -1.4078
79 R A -2.4187
80 S A -1.7516
81 S A -1.5656
82 R A -2.0986
83 P A -0.6685
84 S A 0.0000
85 P A -0.1433
86 I A -0.2200
87 S A -0.3530
88 I A -0.7775
89 N A -1.7770
90 Y A -1.4914
91 R A -2.5347
92 T A -1.4994
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Laboratory of Theory of Biopolymers 2018