| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYVITYGETGHGWFPGQTFEVPGSKSTATISGLKPGVDYTITVYAFYPRSSRPSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6472 | |
| 2 | S | A | 0.2715 | |
| 3 | D | A | -0.2955 | |
| 4 | V | A | -0.5322 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.6249 | |
| 7 | D | A | -3.6086 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.2184 | |
| 10 | V | A | 0.0620 | |
| 11 | V | A | 1.5248 | |
| 12 | A | A | 0.8878 | |
| 13 | A | A | 0.3065 | |
| 14 | T | A | -0.3385 | |
| 15 | P | A | -1.1252 | |
| 16 | T | A | -1.0028 | |
| 17 | S | A | -0.5297 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7147 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.2122 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.4124 | |
| 24 | A | A | -1.7619 | |
| 25 | P | A | -0.5624 | |
| 26 | A | A | 0.3600 | |
| 27 | V | A | 0.5043 | |
| 28 | T | A | -0.1821 | |
| 29 | V | A | -0.6615 | |
| 30 | D | A | -1.6389 | |
| 31 | F | A | -0.9786 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | -0.0898 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.5233 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | -0.8297 | |
| 38 | E | A | -1.6815 | |
| 39 | T | A | -1.3180 | |
| 40 | G | A | -1.0901 | |
| 41 | H | A | -1.1113 | |
| 42 | G | A | -0.2272 | |
| 43 | W | A | 1.1777 | |
| 44 | F | A | 1.0874 | |
| 45 | P | A | 0.2241 | |
| 46 | G | A | -0.3671 | |
| 47 | Q | A | -1.1790 | |
| 48 | T | A | -0.8127 | |
| 49 | F | A | -0.6201 | |
| 50 | E | A | -1.4256 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.3590 | |
| 53 | G | A | -1.3381 | |
| 54 | S | A | -1.3430 | |
| 55 | K | A | -2.0335 | |
| 56 | S | A | -1.4208 | |
| 57 | T | A | -0.7880 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2795 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.7763 | |
| 62 | G | A | -1.1509 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.3853 | |
| 65 | P | A | -1.6519 | |
| 66 | G | A | -1.4347 | |
| 67 | V | A | -1.4375 | |
| 68 | D | A | -2.1799 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.1874 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | -0.0526 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | 0.2237 | |
| 75 | A | A | 0.0000 | |
| 76 | F | A | -0.4699 | |
| 77 | Y | A | 0.0000 | |
| 78 | P | A | -1.4078 | |
| 79 | R | A | -2.4187 | |
| 80 | S | A | -1.7516 | |
| 81 | S | A | -1.5656 | |
| 82 | R | A | -2.0986 | |
| 83 | P | A | -0.6685 | |
| 84 | S | A | 0.0000 | |
| 85 | P | A | -0.1433 | |
| 86 | I | A | -0.2200 | |
| 87 | S | A | -0.3530 | |
| 88 | I | A | -0.7775 | |
| 89 | N | A | -1.7770 | |
| 90 | Y | A | -1.4914 | |
| 91 | R | A | -2.5347 | |
| 92 | T | A | -1.4994 |