| Chain sequence(s) |
I: QSVLTQPPSVSAAPGQKVAISCSGSTSNIGDNFVSWYQQFPGTAPKLLLYDDARRPSGIPDRFSGSKSGTSATLGITGLQTGDEAVYFCSTWDNSLNVVLFGGGTKLTVL
G: EVQLVESGGGLVQPGRSLTLSCGASGFTFEDYAMHWVRQAPGKGLEWVSGIDWNSGVIGYADSVKGRFIISRDNAKNSLYLHMRSLTAEDTALYYCAKDVYSESGSGSYYDYWGQGTLVTVSS input PDB |
| Selected Chain(s) | G,I |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | G | -2.0616 | |
| 2 | V | G | -1.1766 | |
| 3 | Q | G | -1.3083 | |
| 4 | L | G | 0.0000 | |
| 5 | V | G | 1.0050 | |
| 6 | E | G | 0.1215 | |
| 7 | S | G | 0.1100 | |
| 8 | G | G | -0.3087 | |
| 9 | G | G | 0.2889 | |
| 11 | G | G | 0.7967 | |
| 12 | L | G | 1.4919 | |
| 13 | V | G | -0.1638 | |
| 14 | Q | G | -1.4651 | |
| 15 | P | G | -1.5454 | |
| 16 | G | G | -2.0931 | |
| 17 | R | G | -2.8270 | |
| 18 | S | G | -1.9398 | |
| 19 | L | G | -0.7288 | |
| 20 | T | G | -0.0979 | |
| 21 | L | G | 0.0000 | |
| 22 | S | G | 0.2998 | |
| 23 | C | G | 0.0000 | |
| 24 | G | G | 0.0480 | |
| 25 | A | G | 0.0000 | |
| 26 | S | G | -0.7908 | |
| 27 | G | G | -1.2244 | |
| 28 | F | G | -0.8733 | |
| 29 | T | G | -0.9156 | |
| 30 | F | G | 0.0000 | |
| 35 | E | G | -1.9901 | |
| 36 | D | G | -1.7615 | |
| 37 | Y | G | -0.3457 | |
| 38 | A | G | 0.0000 | |
| 39 | M | G | 0.0000 | |
| 40 | H | G | 0.0000 | |
| 41 | W | G | 0.0000 | |
| 42 | V | G | 0.0000 | |
| 43 | R | G | 0.0000 | |
| 44 | Q | G | -0.7670 | |
| 45 | A | G | -1.0038 | |
| 46 | P | G | -0.9667 | |
| 47 | G | G | -1.4766 | |
| 48 | K | G | -2.3328 | |
| 49 | G | G | -1.5332 | |
| 50 | L | G | 0.0000 | |
| 51 | E | G | -1.2340 | |
| 52 | W | G | 0.0000 | |
| 53 | V | G | 0.0000 | |
| 54 | S | G | 0.0000 | |
| 55 | G | G | 0.0000 | |
| 56 | I | G | 0.0000 | |
| 57 | D | G | -0.5189 | |
| 58 | W | G | -0.6943 | |
| 59 | N | G | -1.4136 | |
| 62 | S | G | -0.5576 | |
| 63 | G | G | -0.0821 | |
| 64 | V | G | 1.1471 | |
| 65 | I | G | 0.4374 | |
| 66 | G | G | 0.0448 | |
| 67 | Y | G | -0.6680 | |
| 68 | A | G | -1.5870 | |
| 69 | D | G | -2.6128 | |
| 70 | S | G | -1.8738 | |
| 71 | V | G | 0.0000 | |
| 72 | K | G | -2.5174 | |
| 74 | G | G | -1.7482 | |
| 75 | R | G | -1.7327 | |
| 76 | F | G | 0.0000 | |
| 77 | I | G | 0.6027 | |
| 78 | I | G | 0.0000 | |
| 79 | S | G | 0.2494 | |
| 80 | R | G | -0.7868 | |
| 81 | D | G | -1.5728 | |
| 82 | N | G | -1.9002 | |
| 83 | A | G | -1.4187 | |
| 84 | K | G | -2.3150 | |
| 85 | N | G | -1.7512 | |
| 86 | S | G | -0.8457 | |
| 87 | L | G | 0.0000 | |
| 88 | Y | G | 0.7929 | |
| 89 | L | G | 0.0000 | |
| 90 | H | G | -0.1105 | |
| 91 | M | G | 0.0000 | |
| 92 | R | G | -2.4091 | |
| 93 | S | G | -1.8516 | |
| 94 | L | G | 0.0000 | |
| 95 | T | G | -1.3340 | |
| 96 | A | G | -1.0157 | |
| 97 | E | G | -1.8297 | |
| 98 | D | G | 0.0000 | |
| 99 | T | G | -0.1539 | |
| 100 | A | G | 0.0000 | |
| 101 | L | G | 0.5306 | |
| 102 | Y | G | 0.0000 | |
| 103 | Y | G | 0.0000 | |
| 104 | C | G | 0.0000 | |
| 105 | A | G | 0.0000 | |
| 106 | K | G | 0.0000 | |
| 107 | D | G | 0.0000 | |
| 108 | V | G | 0.4078 | |
| 109 | Y | G | 0.3447 | |
| 110 | S | G | -0.6870 | |
| 111 | E | G | -1.5459 | |
| 111A | S | G | 0.0000 | |
| 112B | G | G | -1.1534 | |
| 112A | S | G | -0.5614 | |
| 112 | G | G | 0.1349 | |
| 113 | S | G | 0.2532 | |
| 114 | Y | G | 0.5220 | |
| 115 | Y | G | 0.0000 | |
| 116 | D | G | -0.2413 | |
| 117 | Y | G | -0.3612 | |
| 118 | W | G | -0.3034 | |
| 119 | G | G | 0.0000 | |
| 120 | Q | G | -1.0320 | |
| 121 | G | G | -0.1364 | |
| 122 | T | G | 0.3659 | |
| 123 | L | G | 1.4317 | |
| 124 | V | G | 0.0000 | |
| 125 | T | G | 0.5667 | |
| 126 | V | G | 0.0000 | |
| 127 | S | G | -0.2816 | |
| 128 | S | G | -0.4792 | |
| 1 | Q | I | -0.8981 | |
| 2 | S | I | 0.1994 | |
| 3 | V | I | 1.2885 | |
| 4 | L | I | 0.0000 | |
| 5 | T | I | 0.0321 | |
| 6 | Q | I | -0.4132 | |
| 7 | P | I | -0.5301 | |
| 8 | P | I | -0.6293 | |
| 9 | S | I | -0.5795 | |
| 11 | V | I | -0.1802 | |
| 12 | S | I | -0.1078 | |
| 13 | A | I | -0.5957 | |
| 14 | A | I | -0.6415 | |
| 15 | P | I | -1.3579 | |
| 16 | G | I | -1.9007 | |
| 17 | Q | I | -2.4430 | |
| 18 | K | I | -2.4737 | |
| 19 | V | I | 0.0000 | |
| 20 | A | I | -0.4744 | |
| 21 | I | I | 0.0000 | |
| 22 | S | I | -0.3834 | |
| 23 | C | I | 0.0000 | |
| 24 | S | I | -0.1494 | |
| 25 | G | I | -0.0312 | |
| 26 | S | I | -0.4443 | |
| 27 | T | I | -0.9394 | |
| 28 | S | I | -1.0376 | |
| 29 | N | I | 0.0000 | |
| 30 | I | I | 0.0000 | |
| 35 | G | I | -1.3113 | |
| 36 | D | I | -1.8814 | |
| 37 | N | I | 0.0000 | |
| 38 | F | I | 1.2268 | |
| 39 | V | I | 0.0000 | |
| 40 | S | I | 0.0000 | |
| 41 | W | I | 0.0000 | |
| 42 | Y | I | 0.0000 | |
| 43 | Q | I | -0.4093 | |
| 44 | Q | I | 0.0000 | |
| 45 | F | I | 0.7515 | |
| 46 | P | I | 0.1150 | |
| 47 | G | I | -0.3343 | |
| 48 | T | I | -0.2904 | |
| 49 | A | I | -0.5240 | |
| 50 | P | I | 0.0000 | |
| 51 | K | I | -1.2638 | |
| 52 | L | I | 0.0000 | |
| 53 | L | I | 0.0000 | |
| 54 | L | I | 0.0000 | |
| 55 | Y | I | -0.5919 | |
| 56 | D | I | -0.4103 | |
| 57 | D | I | -0.5822 | |
| 65 | A | I | -1.1398 | |
| 66 | R | I | -2.5528 | |
| 67 | R | I | -2.1142 | |
| 68 | P | I | -1.0607 | |
| 69 | S | I | -0.9668 | |
| 70 | G | I | -0.8349 | |
| 71 | I | I | -1.1830 | |
| 72 | P | I | -1.2836 | |
| 74 | D | I | -2.4008 | |
| 75 | R | I | -1.5560 | |
| 76 | F | I | 0.0000 | |
| 77 | S | I | -1.0334 | |
| 78 | G | I | -0.6092 | |
| 79 | S | I | -0.7844 | |
| 80 | K | I | -0.5323 | |
| 83 | S | I | -0.7518 | |
| 84 | G | I | -0.8619 | |
| 85 | T | I | -0.8665 | |
| 86 | S | I | -0.6602 | |
| 87 | A | I | 0.0000 | |
| 88 | T | I | -0.3962 | |
| 89 | L | I | 0.0000 | |
| 90 | G | I | 0.0000 | |
| 91 | I | I | 0.0000 | |
| 92 | T | I | -1.7895 | |
| 93 | G | I | -1.6059 | |
| 94 | L | I | 0.0000 | |
| 95 | Q | I | -1.8664 | |
| 96 | T | I | -0.8809 | |
| 97 | G | I | -0.9302 | |
| 98 | D | I | -0.9140 | |
| 99 | E | I | -0.6885 | |
| 100 | A | I | 0.0000 | |
| 101 | V | I | 0.0116 | |
| 102 | Y | I | 0.0000 | |
| 103 | F | I | 0.0000 | |
| 104 | C | I | 0.0000 | |
| 105 | S | I | 0.0000 | |
| 106 | T | I | 0.0000 | |
| 107 | W | I | -0.2128 | |
| 108 | D | I | 0.0000 | |
| 109 | N | I | -1.7473 | |
| 110 | S | I | -1.1439 | |
| 113 | L | I | -0.8475 | |
| 114 | N | I | -1.2167 | |
| 115 | V | I | -0.5927 | |
| 116 | V | I | -0.0864 | |
| 117 | L | I | 0.0000 | |
| 118 | F | I | 0.0000 | |
| 119 | G | I | 0.0000 | |
| 120 | G | I | -0.8536 | |
| 121 | G | I | -0.8445 | |
| 122 | T | I | 0.0000 | |
| 123 | K | I | -0.7986 | |
| 124 | L | I | 0.0000 | |
| 125 | T | I | -0.2607 | |
| 126 | V | I | 0.4776 | |
| 127 | L | I | 1.5564 |