Project name: fd1ceab1bbefec0

Status: done

Started: 2024-12-19 05:23:17
Settings
Chain sequence(s) I: QSVLTQPPSVSAAPGQKVAISCSGSTSNIGDNFVSWYQQFPGTAPKLLLYDDARRPSGIPDRFSGSKSGTSATLGITGLQTGDEAVYFCSTWDNSLNVVLFGGGTKLTVL
G: EVQLVESGGGLVQPGRSLTLSCGASGFTFEDYAMHWVRQAPGKGLEWVSGIDWNSGVIGYADSVKGRFIISRDNAKNSLYLHMRSLTAEDTALYYCAKDVYSESGSGSYYDYWGQGTLVTVSS
input PDB
Selected Chain(s) G,I
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:13)
Show buried residues

Minimal score value
-2.827
Maximal score value
1.5564
Average score
-0.5152
Total score value
-120.0411

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E G -2.0616
2 V G -1.1766
3 Q G -1.3083
4 L G 0.0000
5 V G 1.0050
6 E G 0.1215
7 S G 0.1100
8 G G -0.3087
9 G G 0.2889
11 G G 0.7967
12 L G 1.4919
13 V G -0.1638
14 Q G -1.4651
15 P G -1.5454
16 G G -2.0931
17 R G -2.8270
18 S G -1.9398
19 L G -0.7288
20 T G -0.0979
21 L G 0.0000
22 S G 0.2998
23 C G 0.0000
24 G G 0.0480
25 A G 0.0000
26 S G -0.7908
27 G G -1.2244
28 F G -0.8733
29 T G -0.9156
30 F G 0.0000
35 E G -1.9901
36 D G -1.7615
37 Y G -0.3457
38 A G 0.0000
39 M G 0.0000
40 H G 0.0000
41 W G 0.0000
42 V G 0.0000
43 R G 0.0000
44 Q G -0.7670
45 A G -1.0038
46 P G -0.9667
47 G G -1.4766
48 K G -2.3328
49 G G -1.5332
50 L G 0.0000
51 E G -1.2340
52 W G 0.0000
53 V G 0.0000
54 S G 0.0000
55 G G 0.0000
56 I G 0.0000
57 D G -0.5189
58 W G -0.6943
59 N G -1.4136
62 S G -0.5576
63 G G -0.0821
64 V G 1.1471
65 I G 0.4374
66 G G 0.0448
67 Y G -0.6680
68 A G -1.5870
69 D G -2.6128
70 S G -1.8738
71 V G 0.0000
72 K G -2.5174
74 G G -1.7482
75 R G -1.7327
76 F G 0.0000
77 I G 0.6027
78 I G 0.0000
79 S G 0.2494
80 R G -0.7868
81 D G -1.5728
82 N G -1.9002
83 A G -1.4187
84 K G -2.3150
85 N G -1.7512
86 S G -0.8457
87 L G 0.0000
88 Y G 0.7929
89 L G 0.0000
90 H G -0.1105
91 M G 0.0000
92 R G -2.4091
93 S G -1.8516
94 L G 0.0000
95 T G -1.3340
96 A G -1.0157
97 E G -1.8297
98 D G 0.0000
99 T G -0.1539
100 A G 0.0000
101 L G 0.5306
102 Y G 0.0000
103 Y G 0.0000
104 C G 0.0000
105 A G 0.0000
106 K G 0.0000
107 D G 0.0000
108 V G 0.4078
109 Y G 0.3447
110 S G -0.6870
111 E G -1.5459
111A S G 0.0000
112B G G -1.1534
112A S G -0.5614
112 G G 0.1349
113 S G 0.2532
114 Y G 0.5220
115 Y G 0.0000
116 D G -0.2413
117 Y G -0.3612
118 W G -0.3034
119 G G 0.0000
120 Q G -1.0320
121 G G -0.1364
122 T G 0.3659
123 L G 1.4317
124 V G 0.0000
125 T G 0.5667
126 V G 0.0000
127 S G -0.2816
128 S G -0.4792
1 Q I -0.8981
2 S I 0.1994
3 V I 1.2885
4 L I 0.0000
5 T I 0.0321
6 Q I -0.4132
7 P I -0.5301
8 P I -0.6293
9 S I -0.5795
11 V I -0.1802
12 S I -0.1078
13 A I -0.5957
14 A I -0.6415
15 P I -1.3579
16 G I -1.9007
17 Q I -2.4430
18 K I -2.4737
19 V I 0.0000
20 A I -0.4744
21 I I 0.0000
22 S I -0.3834
23 C I 0.0000
24 S I -0.1494
25 G I -0.0312
26 S I -0.4443
27 T I -0.9394
28 S I -1.0376
29 N I 0.0000
30 I I 0.0000
35 G I -1.3113
36 D I -1.8814
37 N I 0.0000
38 F I 1.2268
39 V I 0.0000
40 S I 0.0000
41 W I 0.0000
42 Y I 0.0000
43 Q I -0.4093
44 Q I 0.0000
45 F I 0.7515
46 P I 0.1150
47 G I -0.3343
48 T I -0.2904
49 A I -0.5240
50 P I 0.0000
51 K I -1.2638
52 L I 0.0000
53 L I 0.0000
54 L I 0.0000
55 Y I -0.5919
56 D I -0.4103
57 D I -0.5822
65 A I -1.1398
66 R I -2.5528
67 R I -2.1142
68 P I -1.0607
69 S I -0.9668
70 G I -0.8349
71 I I -1.1830
72 P I -1.2836
74 D I -2.4008
75 R I -1.5560
76 F I 0.0000
77 S I -1.0334
78 G I -0.6092
79 S I -0.7844
80 K I -0.5323
83 S I -0.7518
84 G I -0.8619
85 T I -0.8665
86 S I -0.6602
87 A I 0.0000
88 T I -0.3962
89 L I 0.0000
90 G I 0.0000
91 I I 0.0000
92 T I -1.7895
93 G I -1.6059
94 L I 0.0000
95 Q I -1.8664
96 T I -0.8809
97 G I -0.9302
98 D I -0.9140
99 E I -0.6885
100 A I 0.0000
101 V I 0.0116
102 Y I 0.0000
103 F I 0.0000
104 C I 0.0000
105 S I 0.0000
106 T I 0.0000
107 W I -0.2128
108 D I 0.0000
109 N I -1.7473
110 S I -1.1439
113 L I -0.8475
114 N I -1.2167
115 V I -0.5927
116 V I -0.0864
117 L I 0.0000
118 F I 0.0000
119 G I 0.0000
120 G I -0.8536
121 G I -0.8445
122 T I 0.0000
123 K I -0.7986
124 L I 0.0000
125 T I -0.2607
126 V I 0.4776
127 L I 1.5564
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Laboratory of Theory of Biopolymers 2018