Chain sequence(s) |
A: LRIPCCPVNLKRLLVVVVVVVLVVVVIVGALLMGL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18) [INFO] Main: Simulation completed successfully. (00:00:19) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | L | A | 1.0478 | |
2 | R | A | -0.1172 | |
3 | I | A | 1.9094 | |
4 | P | A | 1.2384 | |
5 | C | A | 1.4332 | |
6 | C | A | 1.3664 | |
7 | P | A | 1.0162 | |
8 | V | A | 1.2779 | |
9 | N | A | -0.5093 | |
10 | L | A | 0.8835 | |
11 | K | A | -0.2129 | |
12 | R | A | -0.0865 | |
13 | L | A | 2.0184 | |
14 | L | A | 2.9362 | |
15 | V | A | 3.9946 | |
16 | V | A | 5.0054 | |
17 | V | A | 5.2947 | |
18 | V | A | 6.0594 | |
19 | V | A | 6.2034 | |
20 | V | A | 6.5069 | |
21 | V | A | 6.7227 | |
22 | L | A | 6.5292 | |
23 | V | A | 6.1797 | |
24 | V | A | 6.1546 | |
25 | V | A | 6.0925 | |
26 | V | A | 5.9373 | |
27 | I | A | 6.0600 | |
28 | V | A | 5.0398 | |
29 | G | A | 3.8642 | |
30 | A | A | 3.9253 | |
31 | L | A | 4.4619 | |
32 | L | A | 3.6714 | |
33 | M | A | 2.7882 | |
34 | G | A | 1.9750 | |
35 | L | A | 3.0658 |