| Chain sequence(s) |
A: EVQLQASGGGLAQAGGSLQLSCAAPGRPVRTYTMGWFRQAPGKEREFVAANNWRGTRYAGSVRGRFSISRDNSKNTVYLQMNSLKPEDTAVYYCACAVTADLLLSGNYFRGDDYDYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:56)
[INFO] Main: Simulation completed successfully. (00:02:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9851 | |
| 2 | V | A | -1.4395 | |
| 3 | Q | A | -1.6017 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.3334 | |
| 6 | A | A | -1.0243 | |
| 7 | S | A | -1.0323 | |
| 8 | G | A | -0.7021 | |
| 9 | G | A | -0.6497 | |
| 10 | G | A | 0.0583 | |
| 11 | L | A | 0.9590 | |
| 12 | A | A | 0.0000 | |
| 13 | Q | A | -1.3005 | |
| 14 | A | A | -1.4557 | |
| 15 | G | A | -1.3412 | |
| 16 | G | A | -1.1022 | |
| 17 | S | A | -1.0952 | |
| 18 | L | A | -0.6248 | |
| 19 | Q | A | -1.2794 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.6492 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.0002 | |
| 24 | A | A | 0.0000 | |
| 25 | P | A | -1.2207 | |
| 26 | G | A | -1.0903 | |
| 27 | R | A | -0.9730 | |
| 28 | P | A | -1.5627 | |
| 29 | V | A | 0.0000 | |
| 30 | R | A | -2.2609 | |
| 31 | T | A | -0.7929 | |
| 32 | Y | A | -0.1308 | |
| 33 | T | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -1.9580 | |
| 40 | A | A | -1.8606 | |
| 41 | P | A | -1.3156 | |
| 42 | G | A | -1.7896 | |
| 43 | K | A | -2.9332 | |
| 44 | E | A | -3.3196 | |
| 45 | R | A | -2.6187 | |
| 46 | E | A | -1.5570 | |
| 47 | F | A | -0.6678 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | N | A | 0.0000 | |
| 52 | N | A | 0.0000 | |
| 53 | W | A | -0.0770 | |
| 54 | R | A | -1.4401 | |
| 55 | G | A | -0.9648 | |
| 56 | T | A | -0.7224 | |
| 57 | R | A | -1.1670 | |
| 58 | Y | A | -0.9065 | |
| 59 | A | A | -0.8858 | |
| 60 | G | A | -1.2576 | |
| 61 | S | A | -1.1902 | |
| 62 | V | A | 0.0000 | |
| 63 | R | A | -2.4395 | |
| 64 | G | A | -1.6877 | |
| 65 | R | A | -1.5544 | |
| 66 | F | A | 0.0000 | |
| 67 | S | A | -0.9357 | |
| 68 | I | A | 0.0000 | |
| 69 | S | A | -0.7874 | |
| 70 | R | A | -1.8566 | |
| 71 | D | A | -2.3902 | |
| 72 | N | A | -2.9914 | |
| 73 | S | A | -2.2116 | |
| 74 | K | A | -2.6299 | |
| 75 | N | A | -2.4133 | |
| 76 | T | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | Y | A | -0.5371 | |
| 79 | L | A | 0.0000 | |
| 80 | Q | A | -0.8833 | |
| 81 | M | A | 0.0000 | |
| 82 | N | A | -1.2764 | |
| 83 | S | A | -1.2029 | |
| 84 | L | A | 0.0000 | |
| 85 | K | A | -2.3318 | |
| 86 | P | A | -1.9306 | |
| 87 | E | A | -2.3517 | |
| 88 | D | A | 0.0000 | |
| 89 | T | A | -0.9719 | |
| 90 | A | A | 0.0000 | |
| 91 | V | A | -0.6596 | |
| 92 | Y | A | 0.0000 | |
| 93 | Y | A | -0.5299 | |
| 94 | C | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | V | A | -0.0639 | |
| 99 | T | A | 0.3011 | |
| 100 | A | A | 0.0888 | |
| 101 | D | A | -0.9826 | |
| 102 | L | A | 0.0000 | |
| 103 | L | A | 1.4393 | |
| 104 | L | A | 1.3915 | |
| 105 | S | A | -0.0894 | |
| 106 | G | A | -0.4398 | |
| 107 | N | A | -1.3675 | |
| 108 | Y | A | -1.0094 | |
| 109 | F | A | -0.9589 | |
| 110 | R | A | -2.0219 | |
| 111 | G | A | -1.9206 | |
| 112 | D | A | -2.6304 | |
| 113 | D | A | -2.3008 | |
| 114 | Y | A | 0.0000 | |
| 115 | D | A | -1.8355 | |
| 116 | Y | A | -0.7572 | |
| 117 | W | A | -0.4353 | |
| 118 | G | A | 0.0000 | |
| 119 | Q | A | -1.4126 | |
| 120 | G | A | -0.9747 | |
| 121 | T | A | 0.0000 | |
| 122 | Q | A | -1.0501 | |
| 123 | V | A | 0.0000 | |
| 124 | T | A | -0.3509 | |
| 125 | V | A | 0.0000 | |
| 126 | S | A | -0.7927 |