Project name: fd510e430e0141c

Status: done

Started: 2024-12-20 12:04:00
Settings
Chain sequence(s) A: NFMLNQPHSVSESPGKTVTISCTRSSGNIDSNYVQWYQQRPGSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDARNVVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTEC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:58)
Show buried residues

Minimal score value
-3.2179
Maximal score value
1.6522
Average score
-0.897
Total score value
-192.8633

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -1.2342
2 F A 0.0000
3 M A 0.1896
4 L A 0.0000
5 N A -1.1805
6 Q A 0.0000
7 P A -1.2754
8 H A -1.7088
9 S A -1.1737
11 V A -0.8285
12 S A -1.0288
13 E A -1.2917
14 S A -1.2828
15 P A -1.7899
16 G A -1.8515
17 K A -2.2027
18 T A -1.1630
19 V A 0.0000
20 T A -0.1431
21 I A 0.0000
22 S A -0.4857
23 C A 0.0000
24 T A -0.9978
25 R A 0.0000
26 S A -0.7541
27 S A -0.8882
28 G A -1.5946
29 N A -2.5416
30 I A 0.0000
35 D A -2.1651
36 S A -1.1231
37 N A -0.6063
38 Y A 0.2407
39 V A 0.0000
40 Q A 0.0000
41 W A 0.0000
42 Y A 0.7319
43 Q A -0.2532
44 Q A -0.9441
45 R A -2.0110
46 P A -1.2972
47 G A -1.0260
48 S A -0.7329
49 A A -0.2061
50 P A 0.0856
51 I A 1.0809
52 T A 0.5996
53 V A 0.0000
54 I A 0.0000
55 Y A -1.0036
56 E A -1.8760
57 D A -1.7065
65 N A -2.3028
66 Q A -2.3849
67 R A -2.4007
68 P A -0.8700
69 S A -0.9685
70 G A -0.8994
71 V A -0.8997
72 P A -1.4080
74 D A -2.3066
75 R A -1.5166
76 F A 0.0000
77 A A -1.2817
78 G A -1.1852
79 S A -1.2743
80 I A -1.3211
81 D A -2.4658
82 R A -3.1905
83 S A -1.7831
84 S A -1.4899
85 N A -2.0959
86 S A 0.0000
87 A A 0.0000
88 S A -0.4941
89 L A 0.0000
90 T A -0.1999
91 I A 0.0000
92 S A -1.3144
93 G A -1.6295
94 L A 0.0000
95 K A -2.8437
96 T A -2.0652
97 E A -2.7832
98 D A 0.0000
99 E A -2.1846
100 A A 0.0000
101 D A 0.0000
102 Y A 0.0000
103 Y A 0.1235
104 C A 0.0000
105 Q A 0.0000
106 S A 0.0000
107 Y A 0.2976
108 D A -1.1281
109 A A -1.2736
114 R A -2.0610
115 N A -1.3923
116 V A 0.9890
117 V A 0.0000
118 F A 1.6522
119 G A 0.0000
120 G A -0.5999
121 G A -0.6656
122 T A 0.0000
123 R A -1.5403
124 L A 0.0000
125 T A 0.0000
126 V A 0.0000
127 L A -0.8127
128 G A -0.8864
129 Q A -1.2168
130 P A -1.3411
131 K A -2.1454
132 A A -1.3569
133 A A -0.7399
134 P A -0.4285
135 S A -0.2713
136 V A 0.0000
137 T A 0.0962
138 L A 0.0000
139 F A 1.1070
140 P A 0.3513
141 P A -0.5953
142 S A -1.2950
143 S A -1.7316
144 E A -3.1136
145 E A -3.0878
146 L A -2.3007
147 Q A -2.6619
148 A A -2.3078
149 N A -2.8850
150 K A -3.0445
151 A A 0.0000
152 T A -0.4473
153 L A 0.0000
154 V A 1.0467
155 C A 0.0000
156 L A 0.9291
157 I A 0.0000
158 S A -0.7176
159 D A -1.8456
160 F A 0.0000
161 Y A 0.0000
162 P A 0.0000
163 G A -0.8060
164 A A -0.4252
165 V A -0.2307
166 T A -0.1973
167 V A 0.0316
168 A A -0.4502
169 W A 0.0000
170 K A -0.9416
171 A A -1.2317
172 D A -1.4058
173 S A -0.9414
174 S A -0.8364
175 P A -0.9028
176 V A -0.9021
177 K A -1.8058
178 A A -0.9903
179 G A -0.8462
180 V A -0.6208
181 E A -1.4786
182 T A -0.4277
183 T A -0.4481
184 T A -0.3776
185 P A -0.4686
186 S A -1.0827
187 K A -2.3546
188 Q A -2.6317
189 S A -2.0539
190 N A -2.6894
191 N A -2.9404
192 K A -2.7400
193 Y A -1.6021
194 A A -0.8411
195 A A 0.0000
196 S A 0.1864
197 S A 0.0000
198 Y A 0.4821
199 L A 0.0000
200 S A -0.6064
201 L A 0.0000
202 T A -2.0434
203 P A -2.5935
204 E A -3.2179
205 Q A -2.4986
206 W A 0.0000
207 K A -3.1106
208 S A -2.4087
209 H A -2.3509
210 K A -2.3958
211 S A -1.4643
212 Y A 0.0000
213 S A 0.0000
214 C A 0.0000
215 Q A -0.9025
216 V A 0.0000
217 T A -0.5775
218 H A 0.0000
219 E A -1.7697
220 G A -1.2589
221 S A -0.6258
222 T A -0.4611
223 V A -0.3348
224 E A -1.8712
225 K A -1.3897
226 T A -0.7703
227 V A -0.1474
228 A A -0.8186
229 P A -1.2724
230 T A -0.9808
231 E A -1.5173
232 C A -0.2049
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Laboratory of Theory of Biopolymers 2018