| Chain sequence(s) |
A: NFMLNQPHSVSESPGKTVTISCTRSSGNIDSNYVQWYQQRPGSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEADYYCQSYDARNVVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTEC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:56)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.2342 | |
| 2 | F | A | 0.0000 | |
| 3 | M | A | 0.1896 | |
| 4 | L | A | 0.0000 | |
| 5 | N | A | -1.1805 | |
| 6 | Q | A | 0.0000 | |
| 7 | P | A | -1.2754 | |
| 8 | H | A | -1.7088 | |
| 9 | S | A | -1.1737 | |
| 11 | V | A | -0.8285 | |
| 12 | S | A | -1.0288 | |
| 13 | E | A | -1.2917 | |
| 14 | S | A | -1.2828 | |
| 15 | P | A | -1.7899 | |
| 16 | G | A | -1.8515 | |
| 17 | K | A | -2.2027 | |
| 18 | T | A | -1.1630 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.1431 | |
| 21 | I | A | 0.0000 | |
| 22 | S | A | -0.4857 | |
| 23 | C | A | 0.0000 | |
| 24 | T | A | -0.9978 | |
| 25 | R | A | 0.0000 | |
| 26 | S | A | -0.7541 | |
| 27 | S | A | -0.8882 | |
| 28 | G | A | -1.5946 | |
| 29 | N | A | -2.5416 | |
| 30 | I | A | 0.0000 | |
| 35 | D | A | -2.1651 | |
| 36 | S | A | -1.1231 | |
| 37 | N | A | -0.6063 | |
| 38 | Y | A | 0.2407 | |
| 39 | V | A | 0.0000 | |
| 40 | Q | A | 0.0000 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | 0.7319 | |
| 43 | Q | A | -0.2532 | |
| 44 | Q | A | -0.9441 | |
| 45 | R | A | -2.0110 | |
| 46 | P | A | -1.2972 | |
| 47 | G | A | -1.0260 | |
| 48 | S | A | -0.7329 | |
| 49 | A | A | -0.2061 | |
| 50 | P | A | 0.0856 | |
| 51 | I | A | 1.0809 | |
| 52 | T | A | 0.5996 | |
| 53 | V | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | Y | A | -1.0036 | |
| 56 | E | A | -1.8760 | |
| 57 | D | A | -1.7065 | |
| 65 | N | A | -2.3028 | |
| 66 | Q | A | -2.3849 | |
| 67 | R | A | -2.4007 | |
| 68 | P | A | -0.8700 | |
| 69 | S | A | -0.9685 | |
| 70 | G | A | -0.8994 | |
| 71 | V | A | -0.8997 | |
| 72 | P | A | -1.4080 | |
| 74 | D | A | -2.3066 | |
| 75 | R | A | -1.5166 | |
| 76 | F | A | 0.0000 | |
| 77 | A | A | -1.2817 | |
| 78 | G | A | -1.1852 | |
| 79 | S | A | -1.2743 | |
| 80 | I | A | -1.3211 | |
| 81 | D | A | -2.4658 | |
| 82 | R | A | -3.1905 | |
| 83 | S | A | -1.7831 | |
| 84 | S | A | -1.4899 | |
| 85 | N | A | -2.0959 | |
| 86 | S | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | S | A | -0.4941 | |
| 89 | L | A | 0.0000 | |
| 90 | T | A | -0.1999 | |
| 91 | I | A | 0.0000 | |
| 92 | S | A | -1.3144 | |
| 93 | G | A | -1.6295 | |
| 94 | L | A | 0.0000 | |
| 95 | K | A | -2.8437 | |
| 96 | T | A | -2.0652 | |
| 97 | E | A | -2.7832 | |
| 98 | D | A | 0.0000 | |
| 99 | E | A | -2.1846 | |
| 100 | A | A | 0.0000 | |
| 101 | D | A | 0.0000 | |
| 102 | Y | A | 0.0000 | |
| 103 | Y | A | 0.1235 | |
| 104 | C | A | 0.0000 | |
| 105 | Q | A | 0.0000 | |
| 106 | S | A | 0.0000 | |
| 107 | Y | A | 0.2976 | |
| 108 | D | A | -1.1281 | |
| 109 | A | A | -1.2736 | |
| 114 | R | A | -2.0610 | |
| 115 | N | A | -1.3923 | |
| 116 | V | A | 0.9890 | |
| 117 | V | A | 0.0000 | |
| 118 | F | A | 1.6522 | |
| 119 | G | A | 0.0000 | |
| 120 | G | A | -0.5999 | |
| 121 | G | A | -0.6656 | |
| 122 | T | A | 0.0000 | |
| 123 | R | A | -1.5403 | |
| 124 | L | A | 0.0000 | |
| 125 | T | A | 0.0000 | |
| 126 | V | A | 0.0000 | |
| 127 | L | A | -0.8127 | |
| 128 | G | A | -0.8864 | |
| 129 | Q | A | -1.2168 | |
| 130 | P | A | -1.3411 | |
| 131 | K | A | -2.1454 | |
| 132 | A | A | -1.3569 | |
| 133 | A | A | -0.7399 | |
| 134 | P | A | -0.4285 | |
| 135 | S | A | -0.2713 | |
| 136 | V | A | 0.0000 | |
| 137 | T | A | 0.0962 | |
| 138 | L | A | 0.0000 | |
| 139 | F | A | 1.1070 | |
| 140 | P | A | 0.3513 | |
| 141 | P | A | -0.5953 | |
| 142 | S | A | -1.2950 | |
| 143 | S | A | -1.7316 | |
| 144 | E | A | -3.1136 | |
| 145 | E | A | -3.0878 | |
| 146 | L | A | -2.3007 | |
| 147 | Q | A | -2.6619 | |
| 148 | A | A | -2.3078 | |
| 149 | N | A | -2.8850 | |
| 150 | K | A | -3.0445 | |
| 151 | A | A | 0.0000 | |
| 152 | T | A | -0.4473 | |
| 153 | L | A | 0.0000 | |
| 154 | V | A | 1.0467 | |
| 155 | C | A | 0.0000 | |
| 156 | L | A | 0.9291 | |
| 157 | I | A | 0.0000 | |
| 158 | S | A | -0.7176 | |
| 159 | D | A | -1.8456 | |
| 160 | F | A | 0.0000 | |
| 161 | Y | A | 0.0000 | |
| 162 | P | A | 0.0000 | |
| 163 | G | A | -0.8060 | |
| 164 | A | A | -0.4252 | |
| 165 | V | A | -0.2307 | |
| 166 | T | A | -0.1973 | |
| 167 | V | A | 0.0316 | |
| 168 | A | A | -0.4502 | |
| 169 | W | A | 0.0000 | |
| 170 | K | A | -0.9416 | |
| 171 | A | A | -1.2317 | |
| 172 | D | A | -1.4058 | |
| 173 | S | A | -0.9414 | |
| 174 | S | A | -0.8364 | |
| 175 | P | A | -0.9028 | |
| 176 | V | A | -0.9021 | |
| 177 | K | A | -1.8058 | |
| 178 | A | A | -0.9903 | |
| 179 | G | A | -0.8462 | |
| 180 | V | A | -0.6208 | |
| 181 | E | A | -1.4786 | |
| 182 | T | A | -0.4277 | |
| 183 | T | A | -0.4481 | |
| 184 | T | A | -0.3776 | |
| 185 | P | A | -0.4686 | |
| 186 | S | A | -1.0827 | |
| 187 | K | A | -2.3546 | |
| 188 | Q | A | -2.6317 | |
| 189 | S | A | -2.0539 | |
| 190 | N | A | -2.6894 | |
| 191 | N | A | -2.9404 | |
| 192 | K | A | -2.7400 | |
| 193 | Y | A | -1.6021 | |
| 194 | A | A | -0.8411 | |
| 195 | A | A | 0.0000 | |
| 196 | S | A | 0.1864 | |
| 197 | S | A | 0.0000 | |
| 198 | Y | A | 0.4821 | |
| 199 | L | A | 0.0000 | |
| 200 | S | A | -0.6064 | |
| 201 | L | A | 0.0000 | |
| 202 | T | A | -2.0434 | |
| 203 | P | A | -2.5935 | |
| 204 | E | A | -3.2179 | |
| 205 | Q | A | -2.4986 | |
| 206 | W | A | 0.0000 | |
| 207 | K | A | -3.1106 | |
| 208 | S | A | -2.4087 | |
| 209 | H | A | -2.3509 | |
| 210 | K | A | -2.3958 | |
| 211 | S | A | -1.4643 | |
| 212 | Y | A | 0.0000 | |
| 213 | S | A | 0.0000 | |
| 214 | C | A | 0.0000 | |
| 215 | Q | A | -0.9025 | |
| 216 | V | A | 0.0000 | |
| 217 | T | A | -0.5775 | |
| 218 | H | A | 0.0000 | |
| 219 | E | A | -1.7697 | |
| 220 | G | A | -1.2589 | |
| 221 | S | A | -0.6258 | |
| 222 | T | A | -0.4611 | |
| 223 | V | A | -0.3348 | |
| 224 | E | A | -1.8712 | |
| 225 | K | A | -1.3897 | |
| 226 | T | A | -0.7703 | |
| 227 | V | A | -0.1474 | |
| 228 | A | A | -0.8186 | |
| 229 | P | A | -1.2724 | |
| 230 | T | A | -0.9808 | |
| 231 | E | A | -1.5173 | |
| 232 | C | A | -0.2049 |