| Chain sequence(s) |
A: SSQITFNTTQQGDMYTIIPEVTLTQSCLCRVQILSLREGSSGQSQTKQEKTLSLPANQPIALTKLSLNISPDDRVKIVVTVSDGQSLHLSQQWPP
B: VLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQ input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | S | A | -0.6718 | |
| 4 | S | A | -0.6671 | |
| 5 | Q | A | 0.0000 | |
| 6 | I | A | 0.0000 | |
| 7 | T | A | -1.0081 | |
| 8 | F | A | 0.0000 | |
| 9 | N | A | 0.0725 | |
| 10 | T | A | 0.0000 | |
| 11 | T | A | 1.4118 | |
| 12 | Q | A | 0.5090 | |
| 13 | Q | A | -1.1320 | |
| 14 | G | A | -1.4222 | |
| 15 | D | A | -1.6672 | |
| 16 | M | A | -0.8965 | |
| 17 | Y | A | -0.0027 | |
| 18 | T | A | -0.4090 | |
| 19 | I | A | 0.0000 | |
| 20 | I | A | -0.4409 | |
| 21 | P | A | 0.0000 | |
| 22 | E | A | -0.4071 | |
| 23 | V | A | 0.0000 | |
| 24 | T | A | -0.8597 | |
| 25 | L | A | 0.0000 | |
| 26 | T | A | -1.3271 | |
| 27 | Q | A | -1.6346 | |
| 28 | S | A | -0.8509 | |
| 29 | C | A | 0.0722 | |
| 30 | L | A | 0.9372 | |
| 31 | C | A | 0.0000 | |
| 32 | R | A | -2.7818 | |
| 33 | V | A | 0.0000 | |
| 34 | Q | A | -2.7712 | |
| 35 | I | A | 0.0000 | |
| 36 | L | A | -1.2665 | |
| 37 | S | A | 0.0000 | |
| 38 | L | A | -1.3964 | |
| 39 | R | A | -2.0583 | |
| 40 | E | A | -2.7770 | |
| 41 | G | A | -2.2902 | |
| 42 | S | A | -1.4599 | |
| 43 | S | A | -1.1052 | |
| 44 | G | A | -1.5061 | |
| 45 | Q | A | -2.3964 | |
| 46 | S | A | -1.5275 | |
| 47 | Q | A | -1.8385 | |
| 48 | T | A | -1.5702 | |
| 49 | K | A | -2.8588 | |
| 50 | Q | A | -3.4159 | |
| 51 | E | A | -4.1636 | |
| 52 | K | A | -3.5142 | |
| 53 | T | A | -1.8645 | |
| 54 | L | A | -0.4393 | |
| 55 | S | A | 0.1352 | |
| 56 | L | A | 0.0000 | |
| 57 | P | A | -0.7468 | |
| 58 | A | A | -1.5259 | |
| 59 | N | A | -2.0693 | |
| 60 | Q | A | -1.7637 | |
| 61 | P | A | -0.7670 | |
| 62 | I | A | 0.0210 | |
| 63 | A | A | -0.1057 | |
| 64 | L | A | -0.1235 | |
| 65 | T | A | -0.8938 | |
| 66 | K | A | -1.6386 | |
| 67 | L | A | 0.0000 | |
| 68 | S | A | -0.5645 | |
| 69 | L | A | -0.3844 | |
| 70 | N | A | -0.9253 | |
| 71 | I | A | -1.1664 | |
| 72 | S | A | -1.4324 | |
| 73 | P | A | -1.6094 | |
| 74 | D | A | -2.6105 | |
| 75 | D | A | -2.7160 | |
| 76 | R | A | -3.0356 | |
| 77 | V | A | -1.8943 | |
| 78 | K | A | -1.3050 | |
| 79 | I | A | 0.0000 | |
| 80 | V | A | -0.1748 | |
| 81 | V | A | 0.0000 | |
| 82 | T | A | -0.8596 | |
| 83 | V | A | 0.0000 | |
| 84 | S | A | -1.4067 | |
| 85 | D | A | -1.3735 | |
| 86 | G | A | -1.5474 | |
| 87 | Q | A | -1.7279 | |
| 88 | S | A | -1.0693 | |
| 89 | L | A | -0.8455 | |
| 90 | H | A | -1.3695 | |
| 91 | L | A | -0.3385 | |
| 92 | S | A | -0.4890 | |
| 93 | Q | A | 0.0000 | |
| 94 | Q | A | -0.3462 | |
| 95 | W | A | 0.0000 | |
| 96 | P | A | -0.3449 | |
| 97 | P | A | -0.9131 | |
| 37 | V | B | 2.7628 | |
| 38 | L | B | 3.1302 | |
| 39 | Y | B | 2.8615 | |
| 40 | V | B | 2.6722 | |
| 41 | G | B | 0.6939 | |
| 42 | S | B | -0.0022 | |
| 43 | K | B | -1.7818 | |
| 44 | T | B | 0.0000 | |
| 45 | K | B | -1.7738 | |
| 46 | E | B | -1.7795 | |
| 47 | G | B | -0.9865 | |
| 48 | V | B | -0.2350 | |
| 49 | V | B | 0.7527 | |
| 50 | H | B | -0.1967 | |
| 51 | G | B | 0.1220 | |
| 52 | V | B | 1.4714 | |
| 53 | A | B | 1.0536 | |
| 54 | T | B | 1.2458 | |
| 55 | V | B | 1.1568 | |
| 56 | A | B | -0.4348 | |
| 57 | E | B | -2.4119 | |
| 58 | K | B | -3.3814 | |
| 59 | T | B | -2.5356 | |
| 60 | K | B | -3.5215 | |
| 61 | E | B | -3.2982 | |
| 62 | Q | B | -1.9234 | |
| 63 | V | B | 0.3494 | |
| 64 | T | B | 0.0579 | |
| 65 | N | B | -0.1953 | |
| 66 | V | B | 0.7800 | |
| 67 | G | B | 0.0161 | |
| 68 | G | B | -0.0096 | |
| 69 | A | B | 0.7188 | |
| 70 | V | B | 2.1224 | |
| 71 | V | B | 2.5995 | |
| 72 | T | B | 1.3827 | |
| 73 | G | B | 0.8431 | |
| 74 | V | B | 2.2834 | |
| 75 | T | B | 1.5226 | |
| 76 | A | B | 1.4517 | |
| 77 | V | B | 2.1045 | |
| 78 | A | B | 0.4806 | |
| 79 | Q | B | -0.5382 | |
| 80 | K | B | -1.4648 | |
| 81 | T | B | -1.0141 | |
| 82 | V | B | -1.0392 | |
| 83 | E | B | -1.9476 | |
| 84 | G | B | -1.3496 | |
| 85 | A | B | -0.6050 | |
| 86 | G | B | -0.4719 | |
| 87 | S | B | 0.4420 | |
| 88 | I | B | 2.0034 | |
| 89 | A | B | 1.5202 | |
| 90 | A | B | 0.8638 | |
| 91 | A | B | 0.8615 | |
| 92 | T | B | 0.7592 | |
| 93 | G | B | 0.6359 | |
| 94 | F | B | 2.0545 | |
| 95 | V | B | 1.4176 | |
| 96 | K | B | -1.6126 | |
| 97 | K | B | -3.2870 | |
| 98 | D | B | -3.5775 | |
| 99 | Q | B | -2.4315 |