| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFNIHYAEYPDFGEAIVLTVPGSERSYDLTGLKPGTEYIVDIWGVKGGLGSWPLSAIFTTGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.4141 | |
| 2 | L | A | 0.8717 | |
| 3 | P | A | 0.1663 | |
| 4 | A | A | 0.0891 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.9928 | |
| 7 | N | A | -1.3331 | |
| 8 | L | A | -0.1281 | |
| 9 | V | A | 1.1717 | |
| 10 | V | A | 0.6086 | |
| 11 | S | A | -0.6351 | |
| 12 | R | A | -1.8557 | |
| 13 | V | A | -1.1369 | |
| 14 | T | A | -1.9609 | |
| 15 | E | A | -3.1131 | |
| 16 | D | A | -3.0395 | |
| 17 | S | A | -2.2072 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2196 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3699 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2850 | |
| 24 | A | A | -1.4098 | |
| 25 | P | A | -1.3351 | |
| 26 | D | A | -2.2182 | |
| 27 | A | A | -1.4650 | |
| 28 | A | A | -1.2008 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5353 | |
| 31 | S | A | -1.4400 | |
| 32 | F | A | 0.0000 | |
| 33 | N | A | 0.2251 | |
| 34 | I | A | 0.0000 | |
| 35 | H | A | 0.7232 | |
| 36 | Y | A | 0.0000 | |
| 37 | A | A | 0.0000 | |
| 38 | E | A | -0.6427 | |
| 39 | Y | A | 0.1546 | |
| 40 | P | A | -0.2837 | |
| 41 | D | A | -1.3624 | |
| 42 | F | A | 0.4171 | |
| 43 | G | A | -0.8040 | |
| 44 | E | A | -1.4081 | |
| 45 | A | A | 0.2018 | |
| 46 | I | A | 1.0740 | |
| 47 | V | A | 1.9042 | |
| 48 | L | A | 1.2105 | |
| 49 | T | A | 0.3435 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1409 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5988 | |
| 54 | E | A | -1.6782 | |
| 55 | R | A | -0.9519 | |
| 56 | S | A | -0.6433 | |
| 57 | Y | A | -0.7103 | |
| 58 | D | A | -1.6732 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.4924 | |
| 61 | G | A | -1.5608 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.0602 | |
| 64 | P | A | -2.6935 | |
| 65 | G | A | -1.9776 | |
| 66 | T | A | -1.7183 | |
| 67 | E | A | -0.7990 | |
| 68 | Y | A | 0.0000 | |
| 69 | I | A | 0.8939 | |
| 70 | V | A | 0.0000 | |
| 71 | D | A | 0.2942 | |
| 72 | I | A | 0.0000 | |
| 73 | W | A | 0.2384 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.4999 | |
| 76 | K | A | -1.5480 | |
| 77 | G | A | -1.2938 | |
| 78 | G | A | -0.8784 | |
| 79 | L | A | 0.1213 | |
| 80 | G | A | 0.4954 | |
| 81 | S | A | 0.0000 | |
| 82 | W | A | 1.3806 | |
| 83 | P | A | 0.2385 | |
| 84 | L | A | -0.0496 | |
| 85 | S | A | 0.4543 | |
| 86 | A | A | 1.0531 | |
| 87 | I | A | 1.6631 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.6605 | |
| 90 | T | A | 0.0000 | |
| 91 | G | A | -1.8489 | |
| 92 | G | A | -1.7865 |