| Chain sequence(s) |
B: AEEKLKELSKKLFEEFEKAAEYIKAGDLEAAEAEFKKAGKLGKEMEKLAK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:42)
[INFO] Main: Simulation completed successfully. (00:02:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -2.0398 | |
| 2 | E | B | -3.6183 | |
| 3 | E | B | -4.2902 | |
| 4 | K | B | -3.8637 | |
| 5 | L | B | -3.6894 | |
| 6 | K | B | -4.5708 | |
| 7 | E | B | -4.3802 | |
| 8 | L | B | 0.0000 | |
| 9 | S | B | -2.2747 | |
| 10 | K | B | -2.9041 | |
| 11 | K | B | -2.4521 | |
| 12 | L | B | -1.2145 | |
| 13 | F | B | 0.0352 | |
| 14 | E | B | -1.6538 | |
| 15 | E | B | -1.5752 | |
| 16 | F | B | -0.8504 | |
| 17 | E | B | -2.1757 | |
| 18 | K | B | -2.3738 | |
| 19 | A | B | 0.0000 | |
| 20 | A | B | -1.7482 | |
| 21 | E | B | -2.6991 | |
| 22 | Y | B | -1.5584 | |
| 23 | I | B | -0.9135 | |
| 24 | K | B | -1.9034 | |
| 25 | A | B | -1.0629 | |
| 26 | G | B | -1.0299 | |
| 27 | D | B | -1.4048 | |
| 28 | L | B | -0.4348 | |
| 29 | E | B | -1.7670 | |
| 30 | A | B | -1.5256 | |
| 31 | A | B | 0.0000 | |
| 32 | E | B | -2.1530 | |
| 33 | A | B | -1.8839 | |
| 34 | E | B | -1.7597 | |
| 35 | F | B | -1.5121 | |
| 36 | K | B | -2.6557 | |
| 37 | K | B | -2.4852 | |
| 38 | A | B | 0.0000 | |
| 39 | G | B | -2.1216 | |
| 40 | K | B | -3.3218 | |
| 41 | L | B | -2.3594 | |
| 42 | G | B | -2.7959 | |
| 43 | K | B | -3.8348 | |
| 44 | E | B | -3.2884 | |
| 45 | M | B | -3.1094 | |
| 46 | E | B | -3.9841 | |
| 47 | K | B | -3.6552 | |
| 48 | L | B | -2.3213 | |
| 49 | A | B | -2.1806 | |
| 50 | K | B | -2.5736 |