| Chain sequence(s) |
H: EVQLQQPGVELVKPGASVKLSCKASGYTFTNYWMHWVKQRPGRGLEWIGRIDPDNGETKYNEKFKTKATLTVDKPSSTAYMHLSSLTSDDSAVYYCARRAYYSKNAMDYWGQGTSVTVSS
L: DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVETDDVATYYCQQSNKDPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:37)
[INFO] Main: Simulation completed successfully. (00:01:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1687 | |
| 2 | V | H | -1.4042 | |
| 3 | Q | H | -2.0702 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0378 | |
| 6 | Q | H | 0.0000 | |
| 7 | P | H | -0.3927 | |
| 8 | G | H | -0.0431 | |
| 9 | V | H | 1.6683 | |
| 11 | E | H | 0.8788 | |
| 12 | L | H | 1.3891 | |
| 13 | V | H | 0.0235 | |
| 14 | K | H | -1.6469 | |
| 15 | P | H | -1.3790 | |
| 16 | G | H | -1.1017 | |
| 17 | A | H | -0.8890 | |
| 18 | S | H | -1.0154 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.6707 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.7130 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.5565 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.3738 | |
| 27 | G | H | -1.2687 | |
| 28 | Y | H | -0.7046 | |
| 29 | T | H | -0.5080 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.5972 | |
| 36 | N | H | -1.1706 | |
| 37 | Y | H | -0.1439 | |
| 38 | W | H | -0.2623 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -1.0223 | |
| 45 | R | H | -1.6156 | |
| 46 | P | H | -1.2187 | |
| 47 | G | H | -1.6423 | |
| 48 | R | H | -2.5426 | |
| 49 | G | H | -1.5527 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.2740 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | 0.0000 | |
| 58 | P | H | 0.0000 | |
| 59 | D | H | -2.9982 | |
| 62 | N | H | -2.4645 | |
| 63 | G | H | -1.7314 | |
| 64 | E | H | -1.8024 | |
| 65 | T | H | -1.1574 | |
| 66 | K | H | -1.6130 | |
| 67 | Y | H | -1.8343 | |
| 68 | N | H | -2.6390 | |
| 69 | E | H | -3.5284 | |
| 70 | K | H | -3.2023 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0319 | |
| 74 | T | H | -1.6584 | |
| 75 | K | H | -1.4262 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7219 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3912 | |
| 80 | V | H | -0.7087 | |
| 81 | D | H | -1.1903 | |
| 82 | K | H | -1.7975 | |
| 83 | P | H | -0.9174 | |
| 84 | S | H | -0.7979 | |
| 85 | S | H | -0.8789 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.3524 | |
| 89 | M | H | 0.0000 | |
| 90 | H | H | -1.0854 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7805 | |
| 93 | S | H | -0.8180 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2599 | |
| 96 | S | H | -1.4486 | |
| 97 | D | H | -1.9875 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6543 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2494 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | R | H | 0.1602 | |
| 108 | A | H | 0.0000 | |
| 109 | Y | H | 1.0670 | |
| 110 | Y | H | 1.3417 | |
| 111 | S | H | 0.3997 | |
| 112 | K | H | 0.0350 | |
| 113 | N | H | 0.1308 | |
| 114 | A | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.3318 | |
| 117 | Y | H | 0.0281 | |
| 118 | W | H | -0.5906 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.5809 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | 0.5727 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2228 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5436 | |
| 128 | S | H | -0.6911 | |
| 1 | D | L | -2.0570 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6386 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.5959 | |
| 6 | Q | L | -0.6710 | |
| 7 | S | L | -0.6281 | |
| 8 | P | L | -0.5076 | |
| 9 | A | L | -0.6141 | |
| 10 | S | L | -1.1235 | |
| 11 | L | L | -0.8497 | |
| 12 | A | L | -0.9799 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.3437 | |
| 15 | L | L | -0.5683 | |
| 16 | G | L | -1.4022 | |
| 17 | Q | L | -2.5413 | |
| 18 | R | L | -2.8527 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6420 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8993 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5717 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.3140 | |
| 27 | E | L | -2.3241 | |
| 28 | S | L | -2.1860 | |
| 29 | V | L | 0.0000 | |
| 30 | D | L | -1.2502 | |
| 31 | N | L | -0.6251 | |
| 34 | Y | L | 0.9225 | |
| 35 | G | L | 0.0076 | |
| 36 | I | L | 0.3118 | |
| 37 | S | L | -0.5871 | |
| 38 | F | L | -0.4061 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2538 | |
| 45 | K | L | -1.5264 | |
| 46 | P | L | -1.0367 | |
| 47 | G | L | -1.4253 | |
| 48 | Q | L | -2.1115 | |
| 49 | P | L | -1.3573 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.6646 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.2909 | |
| 56 | R | L | -0.3685 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4716 | |
| 66 | N | L | -0.5372 | |
| 67 | L | L | 0.0044 | |
| 68 | E | L | -0.5187 | |
| 69 | S | L | -0.4905 | |
| 70 | G | L | -0.5743 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.2927 | |
| 74 | A | L | -0.2555 | |
| 75 | R | L | -0.9577 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4284 | |
| 78 | G | L | -0.4168 | |
| 79 | S | L | -0.7778 | |
| 80 | G | L | -1.4575 | |
| 83 | S | L | -1.7017 | |
| 84 | R | L | -2.8714 | |
| 85 | T | L | -2.5351 | |
| 86 | D | L | -2.5824 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7798 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.8016 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.0864 | |
| 93 | P | L | -1.8429 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.8251 | |
| 96 | T | L | -1.3891 | |
| 97 | D | L | -1.8935 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.7370 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.0827 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.0000 | |
| 108 | N | L | -1.3259 | |
| 109 | K | L | -2.4456 | |
| 114 | D | L | -2.4915 | |
| 115 | P | L | -2.2798 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.4291 | |
| 118 | F | L | 0.1497 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7513 | |
| 121 | G | L | -1.0647 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.0601 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -2.1401 | |
| 126 | I | L | -1.1956 | |
| 127 | K | L | -1.7967 |