Chain sequence(s) |
A: GPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:48) [INFO] Main: Simulation completed successfully. (00:03:50) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.6910 | |
2 | P | A | -0.7682 | |
3 | G | A | -0.9089 | |
4 | P | A | -0.4547 | |
5 | G | A | 0.5649 | |
6 | L | A | 2.0849 | |
7 | L | A | 2.1074 | |
8 | C | A | 0.7687 | |
9 | H | A | -1.1242 | |
10 | E | A | -2.1882 | |
11 | Q | A | -1.7290 | |
12 | L | A | -0.1254 | |
13 | S | A | -1.1122 | |
14 | D | A | -2.4406 | |
15 | S | A | -2.7199 | |
16 | E | A | -3.9888 | |
17 | E | A | -4.4438 | |
18 | E | A | -4.4669 | |
19 | N | A | -3.9773 | |
20 | D | A | -3.5534 | |
21 | G | A | -2.2512 | |
22 | P | A | -1.6606 | |
23 | G | A | -1.4671 | |
24 | P | A | -1.1414 | |
25 | G | A | -1.4064 | |
26 | Q | A | -1.8863 | |
27 | S | A | -1.0613 | |
28 | T | A | -0.6038 | |
29 | H | A | -0.3361 | |
30 | V | A | 1.3217 | |
31 | D | A | 0.2004 | |
32 | I | A | 0.7830 | |
33 | R | A | -1.4179 | |
34 | T | A | -0.3351 | |
35 | L | A | 0.7731 | |
36 | E | A | -1.2351 | |
37 | D | A | -1.1142 | |
38 | L | A | 1.0196 | |
39 | L | A | 1.6188 | |
40 | M | A | 0.9942 | |
41 | G | A | -0.0347 | |
42 | P | A | -0.1529 | |
43 | G | A | -0.4653 | |
44 | P | A | -0.8352 | |
45 | G | A | -0.8216 | |
46 | T | A | -0.4160 | |
47 | P | A | -0.4415 | |
48 | T | A | 0.0184 | |
49 | L | A | 1.3289 | |
50 | H | A | -0.2119 | |
51 | E | A | -0.5886 | |
52 | Y | A | 1.3715 | |
53 | M | A | 1.6136 | |
54 | L | A | 1.1345 | |
55 | D | A | -0.4621 | |
56 | L | A | 0.6449 | |
57 | Q | A | -1.0175 | |
58 | P | A | -1.5018 | |
59 | E | A | -2.3229 | |
60 | T | A | -1.5290 | |
61 | G | A | -1.3865 | |
62 | P | A | -1.0831 | |
63 | G | A | -1.1647 | |
64 | P | A | -0.6692 | |
65 | G | A | -0.1488 | |
66 | L | A | 1.3352 | |
67 | Q | A | 0.1176 | |
68 | D | A | 0.3415 | |
69 | I | A | 1.8615 | |
70 | V | A | 2.5056 | |
71 | L | A | 1.7413 | |
72 | H | A | 0.2249 | |
73 | L | A | 1.1047 | |
74 | E | A | -1.1770 | |
75 | P | A | -1.7740 | |
76 | Q | A | -2.4683 | |
77 | N | A | -2.4142 | |
78 | E | A | -1.9151 | |
79 | I | A | 0.2481 | |
80 | P | A | -0.3584 | |
81 | G | A | -0.5760 | |
82 | P | A | -1.1452 | |
83 | G | A | -1.4215 | |
84 | P | A | -1.2823 | |
85 | G | A | -1.7560 | |
86 | R | A | -2.3285 | |
87 | A | A | -1.3279 | |
88 | H | A | -0.9733 | |
89 | Y | A | 1.1490 | |
90 | N | A | 1.0767 | |
91 | I | A | 3.1235 | |
92 | V | A | 3.2999 | |
93 | T | A | 2.6679 | |
94 | F | A | 3.5567 | |
95 | A | A | 2.1712 | |
96 | A | A | 1.8499 | |
97 | Y | A | 1.8660 | |
98 | T | A | 1.1298 | |
99 | L | A | 1.0502 | |
100 | Q | A | 0.1672 | |
101 | D | A | -0.3191 | |
102 | I | A | 1.4053 | |
103 | V | A | 1.8797 | |
104 | L | A | 1.6103 | |
105 | H | A | 0.7624 | |
106 | L | A | 1.6868 | |
107 | A | A | 1.7612 | |
108 | A | A | 1.9393 | |
109 | Y | A | 2.5043 | |
110 | L | A | 2.0787 | |
111 | L | A | 2.5446 | |
112 | M | A | 2.6326 | |
113 | G | A | 1.6263 | |
114 | T | A | 1.8124 | |
115 | L | A | 2.5624 | |
116 | G | A | 1.3058 | |
117 | I | A | 1.7718 | |
118 | V | A | 2.1499 | |
119 | A | A | 1.5739 | |
120 | A | A | 1.3987 | |
121 | Y | A | 2.0966 | |
122 | L | A | 1.4412 | |
123 | P | A | 0.0705 | |
124 | A | A | -0.4238 | |
125 | R | A | -1.4526 | |
126 | R | A | -2.3734 | |
127 | A | A | -1.9243 | |
128 | E | A | -2.6932 | |
129 | P | A | -1.9006 | |
130 | Q | A | -1.0940 | |
131 | A | A | -0.3321 | |
132 | A | A | 0.4119 | |
133 | Y | A | 2.2461 | |
134 | V | A | 3.1603 | |
135 | Y | A | 2.1885 | |
136 | D | A | 0.9054 | |
137 | F | A | 1.8709 | |
138 | A | A | 0.9123 | |
139 | F | A | 0.5690 | |
140 | R | A | -1.5706 | |
141 | D | A | -1.4978 | |
142 | L | A | -0.3760 | |
143 | A | A | -0.6869 | |
144 | A | A | -0.7120 | |
145 | Y | A | -0.1966 | |
146 | R | A | -1.1497 | |
147 | F | A | -0.1321 | |
148 | H | A | -1.0842 | |
149 | N | A | -1.7077 | |
150 | I | A | -0.5853 | |
151 | A | A | -0.4613 | |
152 | G | A | -1.0715 | |
153 | H | A | -0.6517 | |
154 | Y | A | 0.2880 | |
155 | A | A | 0.5733 | |
156 | A | A | 0.9945 | |
157 | Y | A | 1.8007 | |
158 | C | A | 1.6050 | |
159 | Y | A | 2.1094 | |
160 | S | A | 1.4055 | |
161 | L | A | 1.8228 | |
162 | Y | A | 1.9545 | |
163 | G | A | 1.3039 | |
164 | T | A | 0.8167 | |
165 | T | A | 1.1807 | |
166 | L | A | 1.9653 | |
167 | A | A | 0.9293 | |
168 | A | A | 1.0183 | |
169 | Y | A | 1.8136 | |
170 | K | A | 0.1044 | |
171 | T | A | 0.6663 | |
172 | V | A | 2.4145 | |
173 | L | A | 1.4633 | |
174 | E | A | -0.2517 | |
175 | L | A | 1.8292 | |
176 | T | A | 0.8436 | |
177 | E | A | -0.2972 | |
178 | V | A | 1.4376 | |
179 | A | A | 0.4488 | |
180 | A | A | -0.2684 | |
181 | Y | A | 0.4417 | |
182 | A | A | -0.7824 | |
183 | E | A | -2.7008 | |
184 | K | A | -2.3733 | |
185 | L | A | -1.8701 | |
186 | R | A | -3.7866 | |
187 | H | A | -3.8610 | |
188 | L | A | -2.8794 | |
189 | N | A | -3.7508 | |
190 | E | A | -4.0718 | |
191 | K | A | -3.4915 | |
192 | R | A | -4.3240 | |
193 | R | A | -3.7623 | |
194 | F | A | -1.3983 | |
195 | H | A | -2.5765 | |
196 | N | A | -2.9545 | |
197 | G | A | -1.7866 | |
198 | P | A | -1.1183 | |
199 | G | A | -0.9582 | |
200 | P | A | -0.7509 | |
201 | G | A | -0.8570 | |
202 | L | A | -1.2371 | |
203 | D | A | -3.0460 | |
204 | K | A | -3.6171 | |
205 | K | A | -3.5868 | |
206 | Q | A | -2.9616 | |
207 | R | A | -2.9208 | |
208 | F | A | -1.7979 | |
209 | H | A | -2.8001 | |
210 | N | A | -2.3464 | |
211 | I | A | -1.1775 | |
212 | R | A | -2.3422 | |
213 | G | A | -2.0561 | |
214 | R | A | -2.3434 | |
215 | W | A | -0.6123 | |
216 | T | A | -0.8397 | |
217 | G | A | -1.1818 | |
218 | P | A | -1.0142 | |
219 | G | A | -1.2734 | |
220 | P | A | -1.3394 | |
221 | G | A | -2.1141 | |
222 | N | A | -2.6497 | |
223 | P | A | -2.0932 | |
224 | A | A | -1.9599 | |
225 | E | A | -3.3116 | |
226 | K | A | -3.3165 | |
227 | L | A | -2.0057 | |
228 | R | A | -3.9608 | |
229 | H | A | -4.0154 | |
230 | L | A | -3.0351 | |
231 | N | A | -3.7239 | |
232 | E | A | -4.4114 | |
233 | K | A | -3.9880 | |
234 | R | A | -4.1921 | |
235 | R | A | -3.3626 | |
236 | F | A | -0.8997 | |
237 | G | A | -1.6187 | |
238 | P | A | -1.0847 | |
239 | G | A | -1.6414 | |
240 | P | A | -0.9794 | |
241 | G | A | -1.0560 | |
242 | S | A | -1.4986 | |
243 | K | A | -2.0117 | |
244 | I | A | -0.2422 | |
245 | S | A | -1.2476 | |
246 | E | A | -1.8501 | |
247 | Y | A | -0.0852 | |
248 | R | A | -1.0574 | |
249 | H | A | -0.7356 | |
250 | Y | A | 1.2895 | |
251 | C | A | 1.2741 | |
252 | Y | A | 1.5088 | |
253 | S | A | 1.2840 | |
254 | L | A | 2.2070 | |
255 | Y | A | 2.1110 | |
256 | G | A | 0.5809 | |
257 | G | A | -0.2700 | |
258 | P | A | -0.8404 | |
259 | G | A | -1.0421 | |
260 | P | A | -0.8245 | |
261 | G | A | -0.7476 |