Project name: 21_x4e7_i14e7_i20e6_x11e6

Status: done

Started: 2025-08-11 19:21:15
Settings
Chain sequence(s) A: GPGPGLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:50)
Show buried residues

Minimal score value
-4.4669
Maximal score value
3.5567
Average score
-0.4794
Total score value
-125.1126

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6910
2 P A -0.7682
3 G A -0.9089
4 P A -0.4547
5 G A 0.5649
6 L A 2.0849
7 L A 2.1074
8 C A 0.7687
9 H A -1.1242
10 E A -2.1882
11 Q A -1.7290
12 L A -0.1254
13 S A -1.1122
14 D A -2.4406
15 S A -2.7199
16 E A -3.9888
17 E A -4.4438
18 E A -4.4669
19 N A -3.9773
20 D A -3.5534
21 G A -2.2512
22 P A -1.6606
23 G A -1.4671
24 P A -1.1414
25 G A -1.4064
26 Q A -1.8863
27 S A -1.0613
28 T A -0.6038
29 H A -0.3361
30 V A 1.3217
31 D A 0.2004
32 I A 0.7830
33 R A -1.4179
34 T A -0.3351
35 L A 0.7731
36 E A -1.2351
37 D A -1.1142
38 L A 1.0196
39 L A 1.6188
40 M A 0.9942
41 G A -0.0347
42 P A -0.1529
43 G A -0.4653
44 P A -0.8352
45 G A -0.8216
46 T A -0.4160
47 P A -0.4415
48 T A 0.0184
49 L A 1.3289
50 H A -0.2119
51 E A -0.5886
52 Y A 1.3715
53 M A 1.6136
54 L A 1.1345
55 D A -0.4621
56 L A 0.6449
57 Q A -1.0175
58 P A -1.5018
59 E A -2.3229
60 T A -1.5290
61 G A -1.3865
62 P A -1.0831
63 G A -1.1647
64 P A -0.6692
65 G A -0.1488
66 L A 1.3352
67 Q A 0.1176
68 D A 0.3415
69 I A 1.8615
70 V A 2.5056
71 L A 1.7413
72 H A 0.2249
73 L A 1.1047
74 E A -1.1770
75 P A -1.7740
76 Q A -2.4683
77 N A -2.4142
78 E A -1.9151
79 I A 0.2481
80 P A -0.3584
81 G A -0.5760
82 P A -1.1452
83 G A -1.4215
84 P A -1.2823
85 G A -1.7560
86 R A -2.3285
87 A A -1.3279
88 H A -0.9733
89 Y A 1.1490
90 N A 1.0767
91 I A 3.1235
92 V A 3.2999
93 T A 2.6679
94 F A 3.5567
95 A A 2.1712
96 A A 1.8499
97 Y A 1.8660
98 T A 1.1298
99 L A 1.0502
100 Q A 0.1672
101 D A -0.3191
102 I A 1.4053
103 V A 1.8797
104 L A 1.6103
105 H A 0.7624
106 L A 1.6868
107 A A 1.7612
108 A A 1.9393
109 Y A 2.5043
110 L A 2.0787
111 L A 2.5446
112 M A 2.6326
113 G A 1.6263
114 T A 1.8124
115 L A 2.5624
116 G A 1.3058
117 I A 1.7718
118 V A 2.1499
119 A A 1.5739
120 A A 1.3987
121 Y A 2.0966
122 L A 1.4412
123 P A 0.0705
124 A A -0.4238
125 R A -1.4526
126 R A -2.3734
127 A A -1.9243
128 E A -2.6932
129 P A -1.9006
130 Q A -1.0940
131 A A -0.3321
132 A A 0.4119
133 Y A 2.2461
134 V A 3.1603
135 Y A 2.1885
136 D A 0.9054
137 F A 1.8709
138 A A 0.9123
139 F A 0.5690
140 R A -1.5706
141 D A -1.4978
142 L A -0.3760
143 A A -0.6869
144 A A -0.7120
145 Y A -0.1966
146 R A -1.1497
147 F A -0.1321
148 H A -1.0842
149 N A -1.7077
150 I A -0.5853
151 A A -0.4613
152 G A -1.0715
153 H A -0.6517
154 Y A 0.2880
155 A A 0.5733
156 A A 0.9945
157 Y A 1.8007
158 C A 1.6050
159 Y A 2.1094
160 S A 1.4055
161 L A 1.8228
162 Y A 1.9545
163 G A 1.3039
164 T A 0.8167
165 T A 1.1807
166 L A 1.9653
167 A A 0.9293
168 A A 1.0183
169 Y A 1.8136
170 K A 0.1044
171 T A 0.6663
172 V A 2.4145
173 L A 1.4633
174 E A -0.2517
175 L A 1.8292
176 T A 0.8436
177 E A -0.2972
178 V A 1.4376
179 A A 0.4488
180 A A -0.2684
181 Y A 0.4417
182 A A -0.7824
183 E A -2.7008
184 K A -2.3733
185 L A -1.8701
186 R A -3.7866
187 H A -3.8610
188 L A -2.8794
189 N A -3.7508
190 E A -4.0718
191 K A -3.4915
192 R A -4.3240
193 R A -3.7623
194 F A -1.3983
195 H A -2.5765
196 N A -2.9545
197 G A -1.7866
198 P A -1.1183
199 G A -0.9582
200 P A -0.7509
201 G A -0.8570
202 L A -1.2371
203 D A -3.0460
204 K A -3.6171
205 K A -3.5868
206 Q A -2.9616
207 R A -2.9208
208 F A -1.7979
209 H A -2.8001
210 N A -2.3464
211 I A -1.1775
212 R A -2.3422
213 G A -2.0561
214 R A -2.3434
215 W A -0.6123
216 T A -0.8397
217 G A -1.1818
218 P A -1.0142
219 G A -1.2734
220 P A -1.3394
221 G A -2.1141
222 N A -2.6497
223 P A -2.0932
224 A A -1.9599
225 E A -3.3116
226 K A -3.3165
227 L A -2.0057
228 R A -3.9608
229 H A -4.0154
230 L A -3.0351
231 N A -3.7239
232 E A -4.4114
233 K A -3.9880
234 R A -4.1921
235 R A -3.3626
236 F A -0.8997
237 G A -1.6187
238 P A -1.0847
239 G A -1.6414
240 P A -0.9794
241 G A -1.0560
242 S A -1.4986
243 K A -2.0117
244 I A -0.2422
245 S A -1.2476
246 E A -1.8501
247 Y A -0.0852
248 R A -1.0574
249 H A -0.7356
250 Y A 1.2895
251 C A 1.2741
252 Y A 1.5088
253 S A 1.2840
254 L A 2.2070
255 Y A 2.1110
256 G A 0.5809
257 G A -0.2700
258 P A -0.8404
259 G A -1.0421
260 P A -0.8245
261 G A -0.7476
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Laboratory of Theory of Biopolymers 2018