Project name: E682K

Status: done

Started: 2025-07-24 08:57:20
Settings
Chain sequence(s) A: DAEFRHDSGYKVHHQKLVFFAEDVGSNKGAIIGLMVGGVVI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:37)
Show buried residues

Minimal score value
-2.3906
Maximal score value
2.6663
Average score
0.0103
Total score value
0.4213

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.0467
2 A A -1.2707
3 E A -1.7018
4 F A -0.2993
5 R A -1.5461
6 H A -1.4799
7 D A -0.9085
8 S A 0.1713
9 G A 0.5784
10 Y A 0.7786
11 K A -0.7624
12 V A -0.0554
13 H A -0.8838
14 H A -1.3673
15 Q A -1.4491
16 K A -0.6576
17 L A 1.9346
18 V A 2.2632
19 F A 2.6663
20 F A 1.6734
21 A A -0.7242
22 E A -2.3906
23 D A -2.1279
24 V A -0.0972
25 G A -1.0658
26 S A -1.5323
27 N A -1.8046
28 K A -1.5466
29 G A 0.6908
30 A A 1.5731
31 I A 2.3166
32 I A 0.9507
33 G A -0.0255
34 L A 0.6527
35 M A 1.0033
36 V A 0.9177
37 G A 0.4029
38 G A 0.6834
39 V A 2.3450
40 V A 2.6375
41 I A 1.9251
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Laboratory of Theory of Biopolymers 2018