| Chain sequence(s) |
A: MKDRCLKYCGICCKECKCVPSGTYGNKHECACYRDKLSSKKTPKCP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:54)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -0.5413 | |
| 2 | K | A | -2.2378 | |
| 3 | D | A | -2.4606 | |
| 4 | R | A | -1.7494 | |
| 5 | C | A | 0.0000 | |
| 6 | L | A | -0.2143 | |
| 7 | K | A | -1.3034 | |
| 8 | Y | A | 0.2514 | |
| 9 | C | A | 0.0000 | |
| 10 | G | A | -0.0964 | |
| 11 | I | A | 0.1518 | |
| 12 | C | A | 0.0000 | |
| 13 | C | A | -0.5111 | |
| 14 | K | A | -2.0335 | |
| 15 | E | A | -2.0697 | |
| 16 | C | A | -1.3001 | |
| 17 | K | A | -1.9397 | |
| 18 | C | A | -0.5853 | |
| 19 | V | A | -0.3119 | |
| 20 | P | A | -1.1232 | |
| 21 | S | A | -0.9323 | |
| 22 | G | A | -0.4328 | |
| 23 | T | A | 0.0696 | |
| 24 | Y | A | 0.4656 | |
| 25 | G | A | -1.1881 | |
| 26 | N | A | -2.5927 | |
| 27 | K | A | -3.0246 | |
| 28 | H | A | -3.1534 | |
| 29 | E | A | -2.9071 | |
| 30 | C | A | -1.8336 | |
| 31 | A | A | -1.2853 | |
| 32 | C | A | -0.9413 | |
| 33 | Y | A | 0.0000 | |
| 34 | R | A | -2.4844 | |
| 35 | D | A | -2.5536 | |
| 36 | K | A | -1.7319 | |
| 37 | L | A | -1.4756 | |
| 38 | S | A | -1.7009 | |
| 39 | S | A | -1.6166 | |
| 40 | K | A | -2.6821 | |
| 41 | K | A | -2.8552 | |
| 42 | T | A | -1.8980 | |
| 43 | P | A | -1.7819 | |
| 44 | K | A | -1.5957 | |
| 45 | C | A | -0.6057 | |
| 46 | P | A | -0.1437 |