Project name: LC1_5

Status: done

Started: 2026-07-29 02:46:51
Settings
Chain sequence(s) A: SLAEEALELLREAAERAVALVAAADPARAPEVAATAEKLLAYAEEIGTASGAYAAAAALEAILYALAQQLAAADAAAAALAEEARRVAREVRERILELIEKE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:29)
Show buried residues

Minimal score value
-4.0019
Maximal score value
0.9498
Average score
-1.1343
Total score value
-115.7015

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -1.1135
2 L A -1.3231
3 A A -1.6144
4 E A -3.2454
5 E A -2.9895
6 A A 0.0000
7 L A -2.7301
8 E A -3.6144
9 L A -2.7871
10 L A 0.0000
11 R A -4.0019
12 E A -3.9041
13 A A 0.0000
14 A A 0.0000
15 E A -3.5713
16 R A -2.8620
17 A A 0.0000
18 V A -0.9853
19 A A -0.6229
20 L A -0.4185
21 V A 0.0000
22 A A -0.3000
23 A A 0.1511
24 A A -0.2645
25 D A -0.7529
26 P A -0.8079
27 A A -0.9235
28 R A -1.6377
29 A A -1.0533
30 P A -1.2400
31 E A -1.9572
32 V A 0.0000
33 A A -1.5422
34 A A -1.5009
35 T A -1.3946
36 A A 0.0000
37 E A -2.8866
38 K A -2.2624
39 L A -1.2709
40 L A -1.6790
41 A A -1.3273
42 Y A -0.3247
43 A A 0.0000
44 E A -2.4792
45 E A -1.9072
46 I A -0.4305
47 G A -1.3650
48 T A -0.6845
49 A A 0.0000
50 S A 0.2977
51 G A 0.0000
52 A A 0.0000
53 Y A 0.1499
54 A A 0.3097
55 A A 0.0000
56 A A 0.0000
57 A A -0.2591
58 A A 0.2676
59 L A 0.0000
60 E A -0.5069
61 A A 0.5943
62 I A 0.9498
63 L A 0.0000
64 Y A 0.4973
65 A A 0.0471
66 L A 0.0000
67 A A 0.0000
68 Q A -1.5100
69 Q A -1.7146
70 L A 0.0000
71 A A -1.1516
72 A A -0.8425
73 A A -0.8825
74 D A -1.3802
75 A A -0.4021
76 A A -0.2152
77 A A 0.0000
78 A A -0.7112
79 A A -0.2584
80 L A -0.0560
81 A A 0.0000
82 E A -1.2901
83 E A -1.4915
84 A A 0.0000
85 R A -1.6399
86 R A -2.6643
87 V A -2.2610
88 A A 0.0000
89 R A -2.9740
90 E A -3.2515
91 V A 0.0000
92 R A -2.4864
93 E A -3.3189
94 R A -3.5840
95 I A 0.0000
96 L A -1.9910
97 E A -3.6643
98 L A 0.0000
99 I A -2.1698
100 E A -3.6339
101 K A -3.6218
102 E A -3.2578
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Laboratory of Theory of Biopolymers 2018