| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGLGGKSFSEYSLGWFRQAPGQGLEAVAAISGDGSTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAELGTSLAPPEASSYTYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:52)
[INFO] Main: Simulation completed successfully. (00:01:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6508 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.1494 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.9101 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2689 | |
| 8 | G | H | -0.6309 | |
| 9 | G | H | 0.1719 | |
| 10 | G | H | 0.7295 | |
| 11 | L | H | 1.4282 | |
| 12 | V | H | -0.0811 | |
| 13 | Q | H | -1.4151 | |
| 14 | P | H | -1.8000 | |
| 15 | G | H | -1.5702 | |
| 16 | G | H | -1.0565 | |
| 17 | S | H | -1.3321 | |
| 18 | L | H | -0.8745 | |
| 19 | R | H | -2.1723 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.5161 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2180 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.8245 | |
| 26 | G | H | -1.4537 | |
| 27 | L | H | -1.5168 | |
| 28 | G | H | -1.4649 | |
| 29 | G | H | -1.3573 | |
| 30 | K | H | -1.8770 | |
| 31 | S | H | -1.3978 | |
| 32 | F | H | 0.0000 | |
| 33 | S | H | -1.8025 | |
| 34 | E | H | -1.8726 | |
| 35 | Y | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.0000 | |
| 41 | R | H | -0.5804 | |
| 42 | Q | H | -0.9522 | |
| 43 | A | H | -1.1127 | |
| 44 | P | H | -0.9913 | |
| 45 | G | H | -1.2801 | |
| 46 | Q | H | -1.9548 | |
| 47 | G | H | -1.4005 | |
| 48 | L | H | -0.9337 | |
| 49 | E | H | -1.9854 | |
| 50 | A | H | -1.0351 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | G | H | 0.0000 | |
| 57 | D | H | -2.4093 | |
| 58 | G | H | -1.4421 | |
| 59 | S | H | -0.9090 | |
| 60 | T | H | -0.1089 | |
| 61 | T | H | 0.4627 | |
| 62 | Y | H | 1.0119 | |
| 63 | Y | H | -0.2824 | |
| 64 | A | H | -1.3065 | |
| 65 | D | H | -2.3917 | |
| 66 | S | H | -1.8697 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -2.4996 | |
| 69 | G | H | -1.8362 | |
| 70 | R | H | -1.6802 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -0.7933 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.5682 | |
| 75 | R | H | -1.4318 | |
| 76 | D | H | -2.1219 | |
| 77 | N | H | -2.2840 | |
| 78 | S | H | -1.7155 | |
| 79 | K | H | -2.4442 | |
| 80 | N | H | -1.8011 | |
| 81 | T | H | -1.1270 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.3450 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -1.6236 | |
| 88 | S | H | -1.4578 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -2.9536 | |
| 91 | A | H | -2.0490 | |
| 92 | E | H | -2.4798 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.5363 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.8870 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.2480 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | E | H | -0.2437 | |
| 103 | L | H | -0.1664 | |
| 104 | G | H | -0.1940 | |
| 105 | T | H | -0.2003 | |
| 106 | S | H | 0.4791 | |
| 107 | L | H | 1.5408 | |
| 108 | A | H | 0.4846 | |
| 109 | P | H | -0.1091 | |
| 110 | P | H | -0.8147 | |
| 111 | E | H | -2.1324 | |
| 112 | A | H | -1.2001 | |
| 113 | S | H | -0.9063 | |
| 114 | S | H | -0.6259 | |
| 115 | Y | H | 0.0000 | |
| 116 | T | H | 0.0816 | |
| 117 | Y | H | -0.0072 | |
| 118 | W | H | 0.2142 | |
| 119 | G | H | -0.0997 | |
| 120 | Q | H | -0.8199 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.6564 | |
| 123 | L | H | 1.7774 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3193 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8708 |