Project name: gp63_004

Status: done

Started: 2026-04-27 14:53:52
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGLGGKSFSEYSLGWFRQAPGQGLEAVAAISGDGSTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAELGTSLAPPEASSYTYWGQGTLVTVS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:53)
Show buried residues

Minimal score value
-2.9536
Maximal score value
1.7774
Average score
-0.6377
Total score value
-80.9847

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.6508
2 V H 0.0000
3 Q H -1.1494
4 L H 0.0000
5 V H 0.9101
6 E H 0.0000
7 S H -0.2689
8 G H -0.6309
9 G H 0.1719
10 G H 0.7295
11 L H 1.4282
12 V H -0.0811
13 Q H -1.4151
14 P H -1.8000
15 G H -1.5702
16 G H -1.0565
17 S H -1.3321
18 L H -0.8745
19 R H -2.1723
20 L H 0.0000
21 S H -0.5161
22 C H 0.0000
23 A H -0.2180
24 A H 0.0000
25 S H -0.8245
26 G H -1.4537
27 L H -1.5168
28 G H -1.4649
29 G H -1.3573
30 K H -1.8770
31 S H -1.3978
32 F H 0.0000
33 S H -1.8025
34 E H -1.8726
35 Y H 0.0000
36 S H 0.0000
37 L H 0.0000
38 G H 0.0000
39 W H 0.0000
40 F H 0.0000
41 R H -0.5804
42 Q H -0.9522
43 A H -1.1127
44 P H -0.9913
45 G H -1.2801
46 Q H -1.9548
47 G H -1.4005
48 L H -0.9337
49 E H -1.9854
50 A H -1.0351
51 V H 0.0000
52 A H 0.0000
53 A H 0.0000
54 I H 0.0000
55 S H 0.0000
56 G H 0.0000
57 D H -2.4093
58 G H -1.4421
59 S H -0.9090
60 T H -0.1089
61 T H 0.4627
62 Y H 1.0119
63 Y H -0.2824
64 A H -1.3065
65 D H -2.3917
66 S H -1.8697
67 V H 0.0000
68 K H -2.4996
69 G H -1.8362
70 R H -1.6802
71 F H 0.0000
72 T H -0.7933
73 I H 0.0000
74 S H -0.5682
75 R H -1.4318
76 D H -2.1219
77 N H -2.2840
78 S H -1.7155
79 K H -2.4442
80 N H -1.8011
81 T H -1.1270
82 L H 0.0000
83 Y H 0.0000
84 L H 0.0000
85 Q H -1.3450
86 M H 0.0000
87 N H -1.6236
88 S H -1.4578
89 L H 0.0000
90 R H -2.9536
91 A H -2.0490
92 E H -2.4798
93 D H 0.0000
94 T H -0.5363
95 A H 0.0000
96 V H 0.8870
97 Y H 0.0000
98 Y H 0.2480
99 C H 0.0000
100 A H 0.0000
101 A H 0.0000
102 E H -0.2437
103 L H -0.1664
104 G H -0.1940
105 T H -0.2003
106 S H 0.4791
107 L H 1.5408
108 A H 0.4846
109 P H -0.1091
110 P H -0.8147
111 E H -2.1324
112 A H -1.2001
113 S H -0.9063
114 S H -0.6259
115 Y H 0.0000
116 T H 0.0816
117 Y H -0.0072
118 W H 0.2142
119 G H -0.0997
120 Q H -0.8199
121 G H 0.0000
122 T H 0.6564
123 L H 1.7774
124 V H 0.0000
125 T H 0.3193
126 V H 0.0000
127 S H -0.8708
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Laboratory of Theory of Biopolymers 2018