Project name: query_structure

Status: done

Started: 2026-03-17 00:53:24
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Chain sequence(s) A: QVQLVESGGGLVQPGGSLTLSCTASGFTLDHYDIGWFRQAPGKEREGVSCINNSDDDTYYADSVKGRFTIFMNNAKDTVYLQMNSLKPEDTAIYYCAEARGCKRGSYEYDFWGQGTQVTVSSKKK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:26)
Show buried residues

Minimal score value
-3.8426
Maximal score value
1.1841
Average score
-1.0158
Total score value
-126.9736

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.1555
2 V A -0.0880
3 Q A -0.5928
4 L A 0.0000
5 V A 0.3287
6 E A 0.0000
7 S A -0.5263
8 G A -0.4971
9 G A -0.4586
10 G A 0.1312
11 L A 1.1841
12 V A 0.3474
13 Q A -1.6017
14 P A -2.0649
15 G A -1.3429
16 G A -0.6547
17 S A -0.6953
18 L A -0.0065
19 T A -0.3302
20 L A 0.0000
21 S A 0.0701
22 C A 0.0000
23 T A -0.4258
24 A A 0.0000
25 S A -0.4611
26 G A -0.6079
27 F A -0.2926
28 T A -0.9458
29 L A 0.0000
30 D A -1.9682
31 H A -2.0447
32 Y A -1.1081
33 D A 0.0000
34 I A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A 0.0000
38 R A -1.5485
39 Q A -2.2782
40 A A -2.0690
41 P A -1.4389
42 G A -2.0001
43 K A -3.4685
44 E A -3.8426
45 R A -3.3528
46 E A -2.3639
47 G A -1.0625
48 V A 0.0000
49 S A 0.0000
50 C A 0.0000
51 I A 0.0000
52 N A -2.6355
53 N A -2.4291
54 S A -2.4719
55 D A -3.6190
56 D A -3.5946
57 D A -3.4004
58 T A -1.5669
59 Y A -1.1831
60 Y A -0.8064
61 A A 0.0000
62 D A -2.4358
63 S A -1.7854
64 V A 0.0000
65 K A -2.5745
66 G A -1.7341
67 R A -1.3008
68 F A 0.0000
69 T A -0.3677
70 I A 0.0000
71 F A 0.3762
72 M A -0.5056
73 N A -1.3833
74 N A -2.1357
75 A A -1.5504
76 K A -2.3506
77 D A -1.8922
78 T A 0.0000
79 V A 0.0000
80 Y A 0.2393
81 L A 0.0000
82 Q A -0.3846
83 M A 0.0000
84 N A -1.0385
85 S A -1.0813
86 L A 0.0000
87 K A -1.9480
88 P A -1.8648
89 E A -2.2378
90 D A 0.0000
91 T A -0.8552
92 A A 0.0000
93 I A -0.5552
94 Y A 0.0000
95 Y A 0.0000
96 C A 0.0000
97 A A 0.0000
98 E A 0.0000
99 A A 0.0000
100 R A -2.5846
101 G A -2.1403
102 C A -1.6788
103 K A -2.7328
104 R A -2.6605
105 G A -1.8047
106 S A -1.3611
107 Y A -0.8876
108 E A -1.9579
109 Y A -1.1700
110 D A -1.6603
111 F A 0.0587
112 W A 0.2881
113 G A -0.1390
114 Q A -0.9228
115 G A -0.6865
116 T A 0.0000
117 Q A -1.0187
118 V A 0.0000
119 T A -0.1409
120 V A 0.0000
121 S A -1.3603
122 S A -2.1464
123 K A -3.2546
124 K A -3.5879
125 K A -3.1196
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Laboratory of Theory of Biopolymers 2018