Chain sequence(s) |
A: SWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDSRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTE
H: QVQLVQSGVEVKKPGASVKVSCKASGYTFTNYYMYWVRQAPGQGLEWMGGIDPSNGGTNFNEKFKNRVTLTTDSSTTTAYMELKSLQFDDTAVYYCARRDYRFDMGFDYWGQGTTVTVSS L: EIVLTQSPATLSLSPGERATLSCRASKGVSTSGYSYLHWYQQKPGQAPRLLIYLASYLESGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCQHSRDLPLTFGGGTKVEIK input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:55) [INFO] Main: Simulation completed successfully. (00:02:58) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | S | A | -0.4520 | |
2 | W | A | -0.8858 | |
3 | N | A | -1.5818 | |
4 | P | A | -1.4163 | |
5 | P | A | 0.0000 | |
6 | T | A | -0.5864 | |
7 | F | A | 0.0000 | |
8 | S | A | -0.1321 | |
9 | P | A | 0.2200 | |
10 | A | A | 0.2991 | |
11 | L | A | 1.1200 | |
12 | L | A | 1.0807 | |
13 | V | A | 1.4957 | |
14 | V | A | -0.6242 | |
15 | T | A | -1.9597 | |
16 | E | A | -3.4291 | |
17 | G | A | -2.9944 | |
18 | D | A | -2.7436 | |
19 | N | A | -2.6363 | |
20 | A | A | 0.0000 | |
21 | T | A | -0.5621 | |
22 | F | A | 0.0000 | |
23 | T | A | -0.2976 | |
24 | C | A | 0.0000 | |
25 | S | A | -1.0544 | |
26 | F | A | 0.0000 | |
27 | S | A | -1.5815 | |
28 | N | A | -1.4657 | |
29 | T | A | -1.3296 | |
30 | S | A | -1.3876 | |
31 | E | A | -2.0205 | |
32 | S | A | -0.9476 | |
33 | F | A | -0.3871 | |
34 | V | A | 0.0000 | |
35 | L | A | 0.0000 | |
36 | N | A | 0.0000 | |
37 | W | A | 0.0000 | |
38 | Y | A | 0.0000 | |
39 | R | A | -1.7294 | |
40 | M | A | -1.7237 | |
41 | S | A | -1.3405 | |
42 | P | A | -1.0643 | |
43 | S | A | -1.3066 | |
44 | N | A | -2.1646 | |
45 | Q | A | -2.1769 | |
46 | T | A | -1.3626 | |
47 | D | A | -1.2750 | |
48 | K | A | 0.0000 | |
49 | L | A | 0.0000 | |
50 | A | A | 0.0000 | |
51 | A | A | 0.0000 | |
52 | F | A | -0.2220 | |
53 | P | A | 0.0000 | |
54 | E | A | -1.6768 | |
55 | D | A | 0.0000 | |
56 | R | A | -2.5214 | |
57 | S | A | 0.0000 | |
58 | Q | A | -1.3966 | |
59 | P | A | 0.0000 | |
60 | G | A | -1.7337 | |
61 | Q | A | -2.2307 | |
62 | D | A | -2.2654 | |
63 | S | A | -1.5888 | |
64 | R | A | -1.3505 | |
65 | F | A | -1.0910 | |
66 | R | A | -1.1028 | |
67 | V | A | -0.5420 | |
68 | T | A | -0.5838 | |
69 | Q | A | -1.0425 | |
70 | L | A | -0.9191 | |
71 | P | A | -1.1510 | |
72 | N | A | -1.9584 | |
73 | G | A | -1.9590 | |
74 | R | A | -2.3728 | |
75 | D | A | -1.4778 | |
76 | F | A | 0.0000 | |
77 | H | A | -0.5347 | |
78 | M | A | 0.0000 | |
79 | S | A | -0.8775 | |
80 | V | A | 0.0000 | |
81 | V | A | -1.7034 | |
82 | R | A | -3.1658 | |
83 | A | A | 0.0000 | |
84 | R | A | -4.0426 | |
85 | R | A | -3.5229 | |
86 | N | A | -2.6957 | |
87 | D | A | 0.0000 | |
88 | S | A | -1.7451 | |
89 | G | A | -1.4396 | |
90 | T | A | -1.4354 | |
91 | Y | A | 0.0000 | |
92 | L | A | 0.0000 | |
93 | C | A | 0.0000 | |
94 | G | A | 0.0000 | |
95 | A | A | 0.0000 | |
96 | I | A | 0.0000 | |
97 | S | A | -0.4554 | |
98 | L | A | 0.0000 | |
99 | A | A | -0.5074 | |
100 | P | A | -1.0368 | |
101 | K | A | -1.9966 | |
102 | A | A | -1.2904 | |
103 | Q | A | -1.3993 | |
104 | I | A | -0.9311 | |
105 | K | A | -1.4349 | |
106 | E | A | -1.7207 | |
107 | S | A | -0.6891 | |
108 | L | A | 0.2720 | |
109 | R | A | -1.4957 | |
110 | A | A | 0.0000 | |
111 | E | A | -1.1666 | |
112 | L | A | 0.0000 | |
113 | R | A | -1.4739 | |
114 | V | A | 0.0000 | |
115 | T | A | -1.9558 | |
116 | E | A | -2.5219 | |
117 | Q | H | -1.2542 | |
118 | V | H | -0.4430 | |
119 | Q | H | -0.9353 | |
120 | L | H | 0.0000 | |
121 | V | H | -0.1882 | |
122 | Q | H | 0.0000 | |
123 | S | H | -0.4075 | |
124 | G | H | 0.0765 | |
125 | V | H | 1.3361 | |
126 | E | H | 0.3103 | |
127 | V | H | 0.9736 | |
128 | K | H | -0.7511 | |
129 | K | H | -1.7707 | |
130 | P | H | -1.3737 | |
131 | G | H | -1.3136 | |
132 | A | H | -1.2917 | |
133 | S | H | -1.5675 | |
134 | V | H | 0.0000 | |
135 | K | H | -1.9709 | |
136 | V | H | 0.0000 | |
137 | S | H | -0.6198 | |
138 | C | H | 0.0000 | |
139 | K | H | -0.8525 | |
140 | A | H | 0.0000 | |
141 | S | H | -0.6730 | |
142 | G | H | -0.8247 | |
143 | Y | H | -0.2859 | |
144 | T | H | -0.2128 | |
145 | F | H | 0.0000 | |
146 | T | H | -0.6229 | |
147 | N | H | -0.6422 | |
148 | Y | H | -0.2359 | |
149 | Y | H | 0.0000 | |
150 | M | H | 0.0000 | |
151 | Y | H | 0.0000 | |
152 | W | H | 0.0000 | |
153 | V | H | 0.0000 | |
154 | R | H | 0.0000 | |
155 | Q | H | -0.4925 | |
156 | A | H | -0.6459 | |
157 | P | H | -0.9583 | |
158 | G | H | -0.8795 | |
159 | Q | H | -1.1095 | |
160 | G | H | 0.0000 | |
161 | L | H | 0.0000 | |
162 | E | H | -1.0631 | |
163 | W | H | 0.0000 | |
164 | M | H | 0.0000 | |
165 | G | H | 0.0000 | |
166 | G | H | 0.0000 | |
167 | I | H | 0.0000 | |
168 | D | H | 0.0000 | |
169 | P | H | -0.8156 | |
170 | S | H | -1.1075 | |
171 | N | H | -1.6158 | |
172 | G | H | -1.1344 | |
173 | G | H | -1.1990 | |
174 | T | H | -0.5867 | |
175 | N | H | -0.5712 | |
176 | F | H | -0.9399 | |
177 | N | H | 0.0000 | |
178 | E | H | -3.1771 | |
179 | K | H | -3.2511 | |
180 | F | H | -2.4537 | |
181 | K | H | -3.2569 | |
182 | N | H | -2.9161 | |
183 | R | H | -2.2050 | |
184 | V | H | 0.0000 | |
185 | T | H | -0.9230 | |
186 | L | H | -0.1656 | |
187 | T | H | -0.3484 | |
188 | T | H | -0.6561 | |
189 | D | H | -0.9601 | |
190 | S | H | -0.6946 | |
191 | S | H | -0.5484 | |
192 | T | H | -0.5805 | |
193 | T | H | -0.6404 | |
194 | T | H | 0.0000 | |
195 | A | H | 0.0000 | |
196 | Y | H | -0.4740 | |
197 | M | H | 0.0000 | |
198 | E | H | -1.5027 | |
199 | L | H | 0.0000 | |
200 | K | H | -1.8740 | |
201 | S | H | -1.5758 | |
202 | L | H | 0.0000 | |
203 | Q | H | -1.3249 | |
204 | F | H | 0.2329 | |
205 | D | H | -1.2288 | |
206 | D | H | 0.0000 | |
207 | T | H | -0.1297 | |
208 | A | H | -0.0002 | |
209 | V | H | 0.3630 | |
210 | Y | H | 0.0000 | |
211 | Y | H | 0.0000 | |
212 | C | H | 0.0000 | |
213 | A | H | 0.0000 | |
214 | R | H | 0.0000 | |
215 | R | H | 0.0000 | |
216 | D | H | -0.4849 | |
217 | Y | H | 0.0000 | |
218 | R | H | -0.4964 | |
219 | F | H | 0.0000 | |
220 | D | H | 0.0000 | |
221 | M | H | 0.0739 | |
222 | G | H | 0.0000 | |
223 | F | H | 0.0000 | |
224 | D | H | -0.3860 | |
225 | Y | H | 0.0504 | |
226 | W | H | 0.0000 | |
227 | G | H | 0.0000 | |
228 | Q | H | -1.1686 | |
229 | G | H | -0.3608 | |
230 | T | H | 0.0000 | |
231 | T | H | 0.5301 | |
232 | V | H | 0.0000 | |
233 | T | H | 0.5199 | |
234 | V | H | 0.0000 | |
235 | S | H | -0.2907 | |
236 | S | H | -0.5933 | |
237 | E | L | -1.5969 | |
238 | I | L | -0.3222 | |
239 | V | L | 0.4308 | |
240 | L | L | 0.0000 | |
241 | T | L | -0.5727 | |
242 | Q | L | -0.9129 | |
243 | S | L | -0.6970 | |
244 | P | L | -0.3632 | |
245 | A | L | -0.3222 | |
246 | T | L | -0.4226 | |
247 | L | L | -0.2333 | |
248 | S | L | -0.3522 | |
249 | L | L | -0.6522 | |
250 | S | L | -0.9486 | |
251 | P | L | -1.3956 | |
252 | G | L | -1.7281 | |
253 | E | L | -2.2289 | |
254 | R | L | -2.5372 | |
255 | A | L | 0.0000 | |
256 | T | L | -0.5249 | |
257 | L | L | 0.0000 | |
258 | S | L | -1.0066 | |
259 | C | L | 0.0000 | |
260 | R | L | -2.3643 | |
261 | A | L | 0.0000 | |
262 | S | L | -1.3665 | |
263 | K | L | -2.0780 | |
264 | G | L | -1.2718 | |
265 | V | L | 0.0000 | |
266 | S | L | -0.7754 | |
267 | T | L | -0.5963 | |
268 | S | L | -0.6972 | |
269 | G | L | -1.0421 | |
270 | Y | L | -0.7096 | |
271 | S | L | -0.5514 | |
272 | Y | L | 0.0000 | |
273 | L | L | 0.0000 | |
274 | H | L | 0.0000 | |
275 | W | L | 0.0000 | |
276 | Y | L | 0.0000 | |
277 | Q | L | 0.0000 | |
278 | Q | L | 0.0000 | |
279 | K | L | -1.6283 | |
280 | P | L | -1.1367 | |
281 | G | L | -1.3672 | |
282 | Q | L | -2.0180 | |
283 | A | L | -1.3094 | |
284 | P | L | 0.0000 | |
285 | R | L | -1.3756 | |
286 | L | L | 0.0000 | |
287 | L | L | 0.0000 | |
288 | I | L | 0.0000 | |
289 | Y | L | 0.0000 | |
290 | L | L | 0.0000 | |
291 | A | L | -0.1550 | |
292 | S | L | -0.1761 | |
293 | Y | L | 0.3280 | |
294 | L | L | 0.3227 | |
295 | E | L | -0.5007 | |
296 | S | L | -0.7235 | |
297 | G | L | -0.4787 | |
298 | V | L | -0.2430 | |
299 | P | L | -0.2021 | |
300 | A | L | -0.1498 | |
301 | R | L | -0.7407 | |
302 | F | L | 0.0000 | |
303 | S | L | -0.2236 | |
304 | G | L | -0.2972 | |
305 | S | L | -0.8074 | |
306 | G | L | -1.3293 | |
307 | S | L | -1.2379 | |
308 | G | L | -1.6213 | |
309 | T | L | -2.0247 | |
310 | D | L | -2.9298 | |
311 | F | L | 0.0000 | |
312 | T | L | -1.0031 | |
313 | L | L | 0.0000 | |
314 | T | L | -0.6088 | |
315 | I | L | 0.0000 | |
316 | S | L | -1.4488 | |
317 | S | L | -1.7917 | |
318 | L | L | 0.0000 | |
319 | E | L | -2.1679 | |
320 | P | L | -1.4606 | |
321 | E | L | -2.4072 | |
322 | D | L | 0.0000 | |
323 | F | L | 0.0000 | |
324 | A | L | 0.0000 | |
325 | V | L | 0.0000 | |
326 | Y | L | 0.0000 | |
327 | Y | L | 0.0000 | |
328 | C | L | 0.0000 | |
329 | Q | L | 0.0000 | |
330 | H | L | 0.0000 | |
331 | S | L | 0.0000 | |
332 | R | L | 0.0000 | |
333 | D | L | -0.7962 | |
334 | L | L | -0.3477 | |
335 | P | L | -0.6987 | |
336 | L | L | 0.0000 | |
337 | T | L | -0.0921 | |
338 | F | L | 0.0000 | |
339 | G | L | -0.3641 | |
340 | G | L | -0.5397 | |
341 | G | L | 0.0000 | |
342 | T | L | 0.0000 | |
343 | K | L | -0.9543 | |
344 | V | L | 0.0000 | |
345 | E | L | -0.4915 | |
346 | I | L | 0.7337 | |
347 | K | L | -0.9413 |