| Chain sequence(s) |
A: MSHHHHHHSGSLEEKLEELLPYAIESINLTANGIKDHEKQEELDKKMGELMDLLIKDPSYVKKVYEEVKKNIDMSSPIARGQLFWMLADILEMDWEEAHKIFDEMWDNPDVEKVNKILDELVKEIEERSKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:59)
[INFO] Main: Simulation completed successfully. (00:07:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5372 | |
| 2 | S | A | -0.6244 | |
| 3 | H | A | -1.7423 | |
| 4 | H | A | -2.3557 | |
| 5 | H | A | -2.7641 | |
| 6 | H | A | -2.8003 | |
| 7 | H | A | -2.5288 | |
| 8 | H | A | -2.1795 | |
| 9 | S | A | -1.6392 | |
| 10 | G | A | -2.0716 | |
| 11 | S | A | -1.7667 | |
| 12 | L | A | -1.8741 | |
| 13 | E | A | -3.0126 | |
| 14 | E | A | -3.8977 | |
| 15 | K | A | -3.3315 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -4.0305 | |
| 18 | E | A | -3.6077 | |
| 19 | L | A | 0.0000 | |
| 20 | L | A | 0.0000 | |
| 21 | P | A | -1.2283 | |
| 22 | Y | A | -1.2754 | |
| 23 | A | A | 0.0000 | |
| 24 | I | A | -0.8875 | |
| 25 | E | A | -1.2649 | |
| 26 | S | A | 0.0000 | |
| 27 | I | A | 0.0000 | |
| 28 | N | A | -0.9084 | |
| 29 | L | A | -0.6699 | |
| 30 | T | A | -0.2807 | |
| 31 | A | A | -0.4837 | |
| 32 | N | A | -1.3084 | |
| 33 | G | A | -0.6262 | |
| 34 | I | A | -0.4288 | |
| 35 | K | A | -2.1713 | |
| 36 | D | A | -2.7818 | |
| 37 | H | A | -3.2559 | |
| 38 | E | A | -3.9397 | |
| 39 | K | A | -3.5597 | |
| 40 | Q | A | 0.0000 | |
| 41 | E | A | -4.6203 | |
| 42 | E | A | -4.3880 | |
| 43 | L | A | 0.0000 | |
| 44 | D | A | -3.8437 | |
| 45 | K | A | -3.9595 | |
| 46 | K | A | -3.3493 | |
| 47 | M | A | 0.0000 | |
| 48 | G | A | -2.4278 | |
| 49 | E | A | -2.6734 | |
| 50 | L | A | 0.0000 | |
| 51 | M | A | -1.4150 | |
| 52 | D | A | -2.0287 | |
| 53 | L | A | -1.2741 | |
| 54 | L | A | 0.0000 | |
| 55 | I | A | 0.0013 | |
| 56 | K | A | -1.3875 | |
| 57 | D | A | -1.0446 | |
| 58 | P | A | -1.2178 | |
| 59 | S | A | -1.4192 | |
| 60 | Y | A | -0.8193 | |
| 61 | V | A | 0.0000 | |
| 62 | K | A | -2.2457 | |
| 63 | K | A | -2.3268 | |
| 64 | V | A | 0.0000 | |
| 65 | Y | A | 0.0000 | |
| 66 | E | A | -2.7600 | |
| 67 | E | A | -2.9068 | |
| 68 | V | A | 0.0000 | |
| 69 | K | A | -2.3132 | |
| 70 | K | A | -3.0669 | |
| 71 | N | A | -2.6316 | |
| 72 | I | A | 0.0000 | |
| 73 | D | A | -2.3242 | |
| 74 | M | A | 0.0000 | |
| 75 | S | A | -1.1985 | |
| 76 | S | A | -0.6395 | |
| 77 | P | A | -0.1180 | |
| 78 | I | A | 0.5877 | |
| 79 | A | A | 0.0000 | |
| 80 | R | A | 0.0000 | |
| 81 | G | A | 0.0000 | |
| 82 | Q | A | 0.1652 | |
| 83 | L | A | 0.0000 | |
| 84 | F | A | 0.0000 | |
| 85 | W | A | -0.0661 | |
| 86 | M | A | 0.0000 | |
| 87 | L | A | 0.0000 | |
| 88 | A | A | 0.0000 | |
| 89 | D | A | -2.0656 | |
| 90 | I | A | -0.9808 | |
| 91 | L | A | 0.0000 | |
| 92 | E | A | -2.4019 | |
| 93 | M | A | -2.3639 | |
| 94 | D | A | -2.8818 | |
| 95 | W | A | -1.5722 | |
| 96 | E | A | -3.0554 | |
| 97 | E | A | -3.1737 | |
| 98 | A | A | 0.0000 | |
| 99 | H | A | -2.7042 | |
| 100 | K | A | -3.5362 | |
| 101 | I | A | -2.0656 | |
| 102 | F | A | -1.9695 | |
| 103 | D | A | -3.1863 | |
| 104 | E | A | -3.2470 | |
| 105 | M | A | 0.0000 | |
| 106 | W | A | -0.9297 | |
| 107 | D | A | -2.2890 | |
| 108 | N | A | -2.4857 | |
| 109 | P | A | -1.7704 | |
| 110 | D | A | -2.6945 | |
| 111 | V | A | -2.2702 | |
| 112 | E | A | -3.1328 | |
| 113 | K | A | -3.2363 | |
| 114 | V | A | 0.0000 | |
| 115 | N | A | -2.4695 | |
| 116 | K | A | -3.1856 | |
| 117 | I | A | -2.0954 | |
| 118 | L | A | 0.0000 | |
| 119 | D | A | -3.0638 | |
| 120 | E | A | -3.4551 | |
| 121 | L | A | 0.0000 | |
| 122 | V | A | 0.0000 | |
| 123 | K | A | -3.9488 | |
| 124 | E | A | -3.6136 | |
| 125 | I | A | 0.0000 | |
| 126 | E | A | -3.6458 | |
| 127 | E | A | -4.3441 | |
| 128 | R | A | -3.7582 | |
| 129 | S | A | -3.0892 | |
| 130 | K | A | -3.6333 | |
| 131 | N | A | -3.1153 | |
| 132 | S | A | -1.8903 |