Project name: fe000c452e07cde

Status: done

Started: 2025-06-03 04:56:18
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Chain sequence(s) H: EVQLVESGGGLVQPGGSLKLSCAASGFTFNTYAMNWVRQASGKGLEWVGRIRSKSNNYATYYADSVKDRFTISRDDSKNTAYLQMNSLKTEDTAVYYCVRGLLRYRFFDVWGQGTTVTVSS
L: DIVMTQSPLSLPVTPGEPASISCRSSKSLLHSNGNTYLYWFLQKPGQSPQLLIYRMSNLASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQHLEYPFTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:19)
Show buried residues

Minimal score value
-2.798
Maximal score value
1.2742
Average score
-0.5903
Total score value
-137.5336

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.7575
2 V H -0.5751
3 Q H -0.4894
4 L H 0.0000
5 V H 1.2742
6 E H 0.0000
7 S H -0.3814
8 G H -0.7109
9 G H -0.3630
11 G H 0.4024
12 L H 1.1651
13 V H -0.0205
14 Q H -1.3204
15 P H -1.6161
16 G H -1.4180
17 G H -1.1087
18 S H -1.0483
19 L H -0.8544
20 K H -1.8254
21 L H 0.0000
22 S H -0.2660
23 C H 0.0000
24 A H -0.0313
25 A H -0.2014
26 S H -0.4439
27 G H -0.8437
28 F H -0.3883
29 T H -0.2914
30 F H 0.0000
35 N H -1.5332
36 T H -0.6778
37 Y H -0.2006
38 A H 0.0000
39 M H 0.0000
40 N H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.7882
45 A H -1.1321
46 S H -0.9536
47 G H -1.4360
48 K H -2.2614
49 G H -1.3583
50 L H 0.0000
51 E H -0.8765
52 W H 0.0000
53 V H 0.0000
54 G H 0.0000
55 R H 0.0000
56 I H 0.0000
57 R H -0.9714
58 S H 0.0000
59 K H -2.6406
60 S H -1.8151
61 N H -1.8940
62 N H -2.1456
63 Y H -1.1709
64 A H -0.6628
65 T H 0.1351
66 Y H 0.3973
67 Y H -0.4875
68 A H 0.0000
69 D H -2.4427
70 S H -1.8146
71 V H 0.0000
72 K H -2.6278
74 D H -2.7980
75 R H -1.9364
76 F H 0.0000
77 T H -0.8884
78 I H 0.0000
79 S H -0.2623
80 R H -1.0769
81 D H -1.6307
82 D H -1.8372
83 S H -1.5705
84 K H -2.4041
85 N H -1.8680
86 T H -1.0047
87 A H 0.0000
88 Y H -0.4392
89 L H 0.0000
90 Q H -1.0396
91 M H 0.0000
92 N H -1.4763
93 S H -1.3512
94 L H 0.0000
95 K H -2.2856
96 T H -1.8099
97 E H -2.3031
98 D H 0.0000
99 T H -0.6462
100 A H 0.0000
101 V H 0.1182
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 V H 0.0000
106 R H 0.0388
107 G H 0.0000
108 L H 0.1312
109 L H -0.0495
110 R H -1.2011
112 Y H -0.1405
113 R H -0.1619
114 F H 0.0530
115 F H 0.0000
116 D H -0.3581
117 V H -0.0235
118 W H -0.0871
119 G H 0.0000
120 Q H -1.0843
121 G H -0.4405
122 T H 0.0000
123 T H 0.0889
124 V H 0.0000
125 T H -0.0305
126 V H 0.0000
127 S H -0.7283
128 S H -0.5615
1 D L -1.7137
2 I L 0.0000
3 V L 0.6328
4 M L 0.0000
5 T L -0.3852
6 Q L 0.0000
7 S L -0.1384
8 P L 0.2742
9 L L 1.0757
10 S L 0.1583
11 L L 0.0040
12 P L -0.5745
13 V L 0.0000
14 T L -1.3275
15 P L -1.4198
16 G L -1.8308
17 E L -2.1743
18 P L -1.8427
19 A L 0.0000
20 S L -0.7508
21 I L 0.0000
22 S L -0.8102
23 C L 0.0000
24 R L -2.3651
25 S L 0.0000
26 S L -1.2298
27 K L -1.9503
28 S L -1.0048
29 L L 0.0000
30 L L 0.5460
31 H L -0.3889
32 S L -0.8645
34 N L -1.5848
35 G L -1.0715
36 N L -0.7140
37 T L 0.0000
38 Y L 0.0000
39 L L 0.0000
40 Y L 0.0000
41 W L 0.0000
42 F L 0.0000
43 L L 0.0000
44 Q L -0.7723
45 K L -1.2011
46 P L -0.8372
47 G L -1.3344
48 Q L -1.8536
49 S L -1.2355
50 P L 0.0000
51 Q L -0.7941
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0433
56 R L -0.1526
57 M L -0.1256
65 S L -0.4214
66 N L -0.4349
67 L L -0.1715
68 A L -0.1281
69 S L -0.3834
70 G L -0.6308
71 V L -0.5066
72 P L -0.9370
74 D L -1.8107
75 R L 0.0000
76 F L 0.0000
77 S L -0.9770
78 G L -0.5555
79 S L -0.6970
80 G L -0.9119
83 S L -0.6765
84 G L -0.7314
85 T L -1.5408
86 D L -2.0786
87 F L 0.0000
88 T L -0.9624
89 L L 0.0000
90 K L -1.4931
91 I L 0.0000
92 S L -1.9987
93 R L -2.6407
94 V L 0.0000
95 E L -1.6416
96 A L -1.0461
97 E L -1.7892
98 D L 0.0000
99 V L -0.3348
100 G L -0.6912
101 V L -0.0486
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 M L 0.0000
106 Q L 0.0000
107 H L 0.0000
108 L L -0.5508
109 E L -1.5701
114 Y L -0.2735
115 P L -0.6533
116 F L 0.0000
117 T L -0.1336
118 F L 0.1875
119 G L 0.0000
120 G L -0.4003
121 G L 0.0000
122 T L 0.0000
123 K L -0.6448
124 V L 0.0000
125 E L -0.4332
126 I L -0.0820
127 K L -1.4896
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Laboratory of Theory of Biopolymers 2018