| Chain sequence(s) |
A: SIPCGESCVWIPCTITALAGCKCKSKVCYN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.0316 | |
| 2 | I | A | 1.4848 | |
| 3 | P | A | 0.1320 | |
| 4 | C | A | 0.0289 | |
| 5 | G | A | -0.1205 | |
| 6 | E | A | 0.0338 | |
| 7 | S | A | 0.0736 | |
| 8 | C | A | 0.5363 | |
| 9 | V | A | 1.1805 | |
| 10 | W | A | 2.2159 | |
| 11 | I | A | 2.5188 | |
| 12 | P | A | 1.1751 | |
| 13 | C | A | 0.9884 | |
| 14 | T | A | 1.3702 | |
| 15 | I | A | 2.2502 | |
| 16 | T | A | 0.9360 | |
| 17 | A | A | 0.7391 | |
| 18 | L | A | 1.7746 | |
| 19 | A | A | 0.5653 | |
| 20 | G | A | -0.4391 | |
| 21 | C | A | 0.0000 | |
| 22 | K | A | -2.1827 | |
| 23 | C | A | -1.1544 | |
| 24 | K | A | -2.1357 | |
| 25 | S | A | -1.4625 | |
| 26 | K | A | -1.3849 | |
| 27 | V | A | -0.8387 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | -0.9525 | |
| 30 | N | A | -1.2884 |