Project name: query_structure

Status: done

Started: 2026-03-17 01:02:33
Settings
Chain sequence(s) A: SIPCGESCVWIPCTITALAGCKCKSKVCYN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:50)
Show buried residues

Minimal score value
-2.1827
Maximal score value
2.5188
Average score
0.2025
Total score value
6.0757

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 0.0316
2 I A 1.4848
3 P A 0.1320
4 C A 0.0289
5 G A -0.1205
6 E A 0.0338
7 S A 0.0736
8 C A 0.5363
9 V A 1.1805
10 W A 2.2159
11 I A 2.5188
12 P A 1.1751
13 C A 0.9884
14 T A 1.3702
15 I A 2.2502
16 T A 0.9360
17 A A 0.7391
18 L A 1.7746
19 A A 0.5653
20 G A -0.4391
21 C A 0.0000
22 K A -2.1827
23 C A -1.1544
24 K A -2.1357
25 S A -1.4625
26 K A -1.3849
27 V A -0.8387
28 C A 0.0000
29 Y A -0.9525
30 N A -1.2884
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Laboratory of Theory of Biopolymers 2018