| Chain sequence(s) |
A: MDTPHANSTQEEPFMDSTLCLYYPTEAATEINDTEWKDTLSQLFLTKGWPTGSIKFKEYTDIASFSVDPQLKCDYNIVLMKYDSNLELDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTNTFEEVATAEKLVITDVVDGVNHKLDVTTNTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | LN102A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.281454 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:01:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:01:07)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:10)
[INFO] Main: Simulation completed successfully. (00:02:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.1615 | |
| 2 | D | A | -1.5207 | |
| 3 | T | A | -1.0356 | |
| 4 | P | A | -1.3048 | |
| 5 | H | A | -1.7371 | |
| 6 | A | A | -1.1988 | |
| 7 | N | A | -1.8904 | |
| 8 | S | A | -1.7193 | |
| 9 | T | A | -2.0739 | |
| 10 | Q | A | -3.0302 | |
| 11 | E | A | -3.2558 | |
| 12 | E | A | -3.1823 | |
| 13 | P | A | -2.2026 | |
| 14 | F | A | -1.1827 | |
| 15 | M | A | -0.7650 | |
| 16 | D | A | -1.6582 | |
| 17 | S | A | 0.0000 | |
| 18 | T | A | -1.0353 | |
| 19 | L | A | 0.0000 | |
| 20 | C | A | 0.0000 | |
| 21 | L | A | 0.0000 | |
| 22 | Y | A | 0.0000 | |
| 23 | Y | A | 0.0000 | |
| 24 | P | A | 0.0000 | |
| 25 | T | A | -0.8448 | |
| 26 | E | A | -1.0672 | |
| 27 | A | A | 0.0000 | |
| 28 | A | A | -0.9887 | |
| 29 | T | A | -1.1065 | |
| 30 | E | A | -1.3330 | |
| 31 | I | A | 0.0000 | |
| 32 | N | A | -2.0876 | |
| 33 | D | A | -2.0813 | |
| 34 | T | A | -1.9700 | |
| 35 | E | A | -3.0366 | |
| 36 | W | A | 0.0000 | |
| 37 | K | A | -2.3534 | |
| 38 | D | A | -2.9644 | |
| 39 | T | A | -1.8835 | |
| 40 | L | A | 0.0000 | |
| 41 | S | A | -1.6130 | |
| 42 | Q | A | -1.4423 | |
| 43 | L | A | -0.5604 | |
| 44 | F | A | 0.0000 | |
| 45 | L | A | -0.1125 | |
| 46 | T | A | -0.3907 | |
| 47 | K | A | -0.6844 | |
| 48 | G | A | -0.3121 | |
| 49 | W | A | 0.0000 | |
| 50 | P | A | -0.3891 | |
| 51 | T | A | -0.7270 | |
| 52 | G | A | -0.6739 | |
| 53 | S | A | -0.6726 | |
| 54 | I | A | 0.0000 | |
| 55 | K | A | -1.3667 | |
| 56 | F | A | 0.0000 | |
| 57 | K | A | -1.4233 | |
| 58 | E | A | -1.3279 | |
| 59 | Y | A | 0.0000 | |
| 60 | T | A | -0.7041 | |
| 61 | D | A | -0.9049 | |
| 62 | I | A | 0.0000 | |
| 63 | A | A | 0.0000 | |
| 64 | S | A | -0.6103 | |
| 65 | F | A | 0.0000 | |
| 66 | S | A | 0.0000 | |
| 67 | V | A | -0.2848 | |
| 68 | D | A | -1.8162 | |
| 69 | P | A | -1.5824 | |
| 70 | Q | A | -2.1894 | |
| 71 | L | A | 0.0000 | |
| 72 | K | A | -2.1713 | |
| 73 | C | A | 0.0000 | |
| 74 | D | A | -1.6303 | |
| 75 | Y | A | 0.0000 | |
| 76 | N | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | L | A | 0.0000 | |
| 80 | M | A | 0.0000 | |
| 81 | K | A | -0.7798 | |
| 82 | Y | A | -1.0461 | |
| 83 | D | A | -1.5275 | |
| 84 | S | A | -1.7682 | |
| 85 | N | A | -1.8656 | |
| 86 | L | A | -1.7464 | |
| 87 | E | A | -2.8040 | |
| 88 | L | A | 0.0000 | |
| 89 | D | A | -2.4847 | |
| 90 | M | A | 0.0000 | |
| 91 | S | A | -1.2005 | |
| 92 | E | A | -1.2047 | |
| 93 | L | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | D | A | -1.4108 | |
| 96 | L | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | L | A | 0.0000 | |
| 99 | N | A | -1.0732 | |
| 100 | E | A | -1.3602 | |
| 101 | W | A | -1.7396 | |
| 102 | N | A | -2.2206 | mutated: LN102A |
| 103 | C | A | -1.5764 | |
| 104 | N | A | -2.0819 | |
| 105 | P | A | -1.3696 | |
| 106 | M | A | 0.0000 | |
| 107 | D | A | -0.5181 | |
| 108 | I | A | 0.3710 | |
| 109 | T | A | 0.7687 | |
| 110 | L | A | 2.0338 | |
| 111 | Y | A | 2.0364 | |
| 112 | Y | A | 1.3007 | |
| 113 | Y | A | 0.2639 | |
| 114 | Q | A | -0.9143 | |
| 115 | Q | A | 0.0000 | |
| 116 | T | A | -1.6940 | |
| 117 | D | A | -2.6490 | |
| 118 | E | A | -2.9460 | |
| 119 | A | A | -1.9954 | |
| 120 | N | A | 0.0000 | |
| 121 | K | A | -1.9970 | |
| 122 | W | A | 0.0000 | |
| 123 | I | A | 0.0000 | |
| 124 | S | A | 0.0000 | |
| 125 | M | A | 0.0000 | |
| 126 | G | A | -0.8269 | |
| 127 | S | A | -0.8428 | |
| 128 | S | A | -0.8933 | |
| 129 | C | A | 0.0000 | |
| 130 | T | A | -0.6215 | |
| 131 | I | A | 0.0000 | |
| 132 | K | A | -1.7363 | |
| 133 | V | A | 0.0000 | |
| 134 | C | A | 0.0000 | |
| 135 | P | A | 0.5385 | |
| 136 | L | A | 0.0000 | |
| 137 | N | A | -0.3027 | |
| 138 | T | A | -0.7691 | |
| 139 | Q | A | -1.0875 | |
| 140 | T | A | -0.0903 | |
| 141 | L | A | 1.0666 | |
| 142 | G | A | 1.1782 | |
| 143 | I | A | 1.9143 | |
| 144 | G | A | 0.6264 | |
| 145 | C | A | 0.6576 | |
| 146 | L | A | 1.4983 | |
| 147 | T | A | 0.6825 | |
| 148 | T | A | 0.0096 | |
| 149 | D | A | -0.6062 | |
| 150 | T | A | -1.2960 | |
| 151 | N | A | -1.8696 | |
| 152 | T | A | -1.1665 | |
| 153 | F | A | 0.0000 | |
| 154 | E | A | -2.7652 | |
| 155 | E | A | -2.3603 | |
| 156 | V | A | -0.6704 | |
| 157 | A | A | 0.0000 | |
| 158 | T | A | -0.5474 | |
| 159 | A | A | -0.5852 | |
| 160 | E | A | -1.5418 | |
| 161 | K | A | -1.4917 | |
| 162 | L | A | 0.0000 | |
| 163 | V | A | 0.0000 | |
| 164 | I | A | -0.4350 | |
| 165 | T | A | 0.0000 | |
| 166 | D | A | -1.8006 | |
| 167 | V | A | -0.6730 | |
| 168 | V | A | 0.0447 | |
| 169 | D | A | -2.1229 | |
| 170 | G | A | -1.1674 | |
| 171 | V | A | -0.4008 | |
| 172 | N | A | -0.4445 | |
| 173 | H | A | 0.0000 | |
| 174 | K | A | 0.3394 | |
| 175 | L | A | 0.0000 | |
| 176 | D | A | -1.2392 | |
| 177 | V | A | 0.0000 | |
| 178 | T | A | -0.6428 | |
| 179 | T | A | -0.8055 | |
| 180 | N | A | -1.3945 | |
| 181 | T | A | -0.9118 | |
| 182 | C | A | 0.0000 | |
| 183 | T | A | -0.6936 | |
| 184 | I | A | 0.0000 | |
| 185 | R | A | -1.5486 | |
| 186 | N | A | -1.7159 | |
| 187 | C | A | 0.0000 | |
| 188 | K | A | -2.6591 | |
| 189 | K | A | -1.9156 | |
| 190 | L | A | -0.6080 | |
| 191 | G | A | -0.8870 | |
| 192 | P | A | -1.2781 | |
| 193 | R | A | -1.3658 | |
| 194 | E | A | -2.0239 | |
| 195 | N | A | -1.3343 | |
| 196 | V | A | 0.0000 | |
| 197 | A | A | 0.0000 | |
| 198 | V | A | 0.0000 | |
| 199 | I | A | 0.0000 | |
| 200 | Q | A | 0.0000 | |
| 201 | V | A | 0.0000 | |
| 202 | G | A | -1.2272 | |
| 203 | G | A | -0.8842 | |
| 204 | S | A | -0.4183 | |
| 205 | N | A | -0.6846 | |
| 206 | I | A | 0.9778 | |
| 207 | L | A | 0.3053 | |
| 208 | D | A | -0.9707 | |
| 209 | I | A | -0.7627 | |
| 210 | T | A | -0.6967 | |
| 211 | A | A | -1.2377 | |
| 212 | D | A | -1.9580 | |
| 213 | P | A | -1.5002 | |
| 214 | T | A | -0.9080 | |
| 215 | T | A | -0.8528 | |
| 216 | A | A | -0.8621 | |
| 217 | P | A | -1.3060 | |
| 218 | Q | A | -1.9954 | |
| 219 | T | A | -1.5342 | |
| 220 | E | A | -2.4161 | |
| 221 | R | A | -1.4726 | |
| 222 | M | A | 0.0000 | |
| 223 | M | A | -0.6861 | |
| 224 | R | A | -0.9711 | |
| 225 | I | A | 0.0000 | |
| 226 | N | A | -1.8249 | |
| 227 | W | A | -1.4658 | |
| 228 | K | A | -2.2258 | |
| 229 | K | A | -1.7855 | |
| 230 | W | A | 0.0000 | |
| 231 | W | A | -0.4429 | |
| 232 | Q | A | -0.8268 | |
| 233 | V | A | 0.0000 | |
| 234 | F | A | 0.0000 | |
| 235 | Y | A | 0.2670 | |
| 236 | T | A | -0.2120 | |
| 237 | V | A | 0.0000 | |
| 238 | V | A | 0.0000 | |
| 239 | D | A | -1.3774 | |
| 240 | Y | A | -0.3409 | |
| 241 | V | A | 0.0000 | |
| 242 | N | A | -1.0893 | |
| 243 | Q | A | -0.9991 | |
| 244 | I | A | -0.3694 | |
| 245 | V | A | 0.0000 | |
| 246 | Q | A | -1.0161 | |
| 247 | V | A | 0.0215 | |
| 248 | M | A | 0.0000 | |
| 249 | S | A | -1.3301 | |
| 250 | K | A | -1.9232 | |
| 251 | R | A | -2.2984 | |
| 252 | S | A | -1.6786 | |
| 253 | R | A | -2.0454 | |
| 254 | S | A | -1.3886 | |
| 255 | L | A | 0.2353 | |
| 256 | N | A | -0.8648 | |
| 257 | S | A | -0.0667 | |
| 258 | A | A | 0.4830 | |
| 259 | A | A | 1.4158 | |
| 260 | F | A | 2.5826 | |
| 261 | Y | A | 2.6181 | |
| 262 | Y | A | 2.0962 | |
| 263 | R | A | 0.2966 | |
| 264 | V | A | 1.3961 |